More than 300 homologs were found in PanDaTox collection
for query gene Dfer_3002 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_3002  acyl-CoA dehydrogenase domain protein  100 
 
 
388 aa  805    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3527  acyl-CoA dehydrogenase domain protein  69.84 
 
 
386 aa  549  1e-155  Spirosoma linguale DSM 74  Bacteria  normal  0.496474  normal 
 
 
-
 
NC_013162  Coch_0730  acyl-CoA dehydrogenase domain protein  59.63 
 
 
381 aa  503  1e-141  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1932  acyl-CoA dehydrogenase domain-containing protein  60.85 
 
 
380 aa  500  1e-140  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  61.64 
 
 
379 aa  495  1e-139  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  61.62 
 
 
390 aa  489  1e-137  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  60.43 
 
 
380 aa  470  1.0000000000000001e-131  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_3396  acyl-CoA dehydrogenase  61.32 
 
 
351 aa  454  1.0000000000000001e-126  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.581792  normal  0.0907936 
 
 
-
 
NC_009675  Anae109_2163  acyl-CoA dehydrogenase domain-containing protein  49.46 
 
 
389 aa  384  1e-105  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.820192  normal  0.287496 
 
 
-
 
NC_011145  AnaeK_2211  acyl-CoA dehydrogenase domain protein  50.41 
 
 
379 aa  375  1e-103  Anaeromyxobacter sp. K  Bacteria  normal  0.0439927  n/a   
 
 
-
 
NC_011891  A2cp1_2299  acyl-CoA dehydrogenase domain protein  50.41 
 
 
379 aa  375  1e-103  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.174362  n/a   
 
 
-
 
NC_007760  Adeh_1647  butyryl-CoA dehydrogenase  49.59 
 
 
379 aa  372  1e-102  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  48.65 
 
 
379 aa  365  1e-100  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  48.92 
 
 
379 aa  366  1e-100  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  49.6 
 
 
379 aa  360  2e-98  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  48.11 
 
 
379 aa  359  5e-98  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  48.11 
 
 
379 aa  359  5e-98  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  48.11 
 
 
379 aa  359  5e-98  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  48.11 
 
 
379 aa  358  9e-98  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  48.11 
 
 
379 aa  358  9e-98  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  48.11 
 
 
379 aa  358  9.999999999999999e-98  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  47.84 
 
 
379 aa  357  1.9999999999999998e-97  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0264  acyl-CoA dehydrogenase domain-containing protein  47.29 
 
 
394 aa  356  3.9999999999999996e-97  Meiothermus ruber DSM 1279  Bacteria  normal  0.0644181  normal  0.99067 
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  47.84 
 
 
379 aa  355  6.999999999999999e-97  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  47.57 
 
 
380 aa  353  4e-96  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  48.12 
 
 
380 aa  350  3e-95  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  48.91 
 
 
377 aa  348  6e-95  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  49.32 
 
 
380 aa  348  1e-94  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008025  Dgeo_0812  acyl-CoA dehydrogenase-like protein  47.18 
 
 
393 aa  347  2e-94  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  46.74 
 
 
376 aa  345  5e-94  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  46.49 
 
 
379 aa  345  8e-94  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  46.19 
 
 
381 aa  344  1e-93  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  46.77 
 
 
376 aa  343  2e-93  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  46.19 
 
 
381 aa  343  2e-93  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  48.79 
 
 
380 aa  343  2.9999999999999997e-93  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  45.63 
 
 
375 aa  343  2.9999999999999997e-93  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  46.51 
 
 
376 aa  342  5.999999999999999e-93  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  46.51 
 
 
376 aa  342  5.999999999999999e-93  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_012854  Rleg_6504  acyl-CoA dehydrogenase domain protein  47.27 
 
 
375 aa  342  5.999999999999999e-93  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.285028  normal  0.547313 
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  45.93 
 
 
381 aa  342  9e-93  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  46.24 
 
 
376 aa  341  1e-92  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  46.51 
 
 
376 aa  341  1e-92  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  46.24 
 
 
376 aa  341  1e-92  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0232  acyl-CoA dehydrogenase domain protein  47.31 
 
 
382 aa  340  2e-92  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.359869 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  46.74 
 
 
379 aa  340  2.9999999999999998e-92  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3827  bytyryl-CoA dehydrogenase (short-chain-acyl-CoA dehydrogenase)  48.24 
 
 
379 aa  340  2.9999999999999998e-92  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  44.99 
 
 
379 aa  339  5e-92  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  47.15 
 
 
379 aa  338  5.9999999999999996e-92  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  45.11 
 
 
377 aa  338  8e-92  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  45.63 
 
 
375 aa  338  9e-92  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  46.47 
 
 
376 aa  336  5e-91  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0067  acyl-CoA dehydrogenase domain protein  46.74 
 
 
394 aa  335  5.999999999999999e-91  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  46.49 
 
 
394 aa  335  5.999999999999999e-91  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  44.26 
 
 
375 aa  335  7.999999999999999e-91  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_011368  Rleg2_4384  acyl-CoA dehydrogenase domain protein  45.55 
 
 
375 aa  335  9e-91  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.17615  normal 
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  44.26 
 
 
375 aa  335  1e-90  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  45.36 
 
 
375 aa  334  1e-90  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_013061  Phep_0136  acyl-CoA dehydrogenase domain protein  47.15 
 
 
379 aa  334  2e-90  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_06620  butyryl-CoA dehydrogenase  46.22 
 
 
380 aa  334  2e-90  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0455  acyl-CoA dehydrogenase domain-containing protein  46.88 
 
 
380 aa  333  4e-90  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  45.21 
 
 
386 aa  332  5e-90  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2037  acyl-CoA dehydrogenase domain-containing protein  45.75 
 
 
375 aa  332  7.000000000000001e-90  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.666233 
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  44.26 
 
 
375 aa  332  7.000000000000001e-90  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_013037  Dfer_3822  acyl-CoA dehydrogenase domain protein  45.8 
 
 
379 aa  332  9e-90  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.962066  normal  0.565208 
 
 
-
 
NC_010682  Rpic_0124  acyl-CoA dehydrogenase domain protein  46.47 
 
 
376 aa  331  1e-89  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_1150  acyl-CoA dehydrogenase domain protein  46.07 
 
 
380 aa  331  1e-89  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  48.11 
 
 
381 aa  331  1e-89  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  43.56 
 
 
376 aa  331  2e-89  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  43.72 
 
 
375 aa  330  2e-89  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  44.44 
 
 
380 aa  329  4e-89  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_009767  Rcas_0583  acyl-CoA dehydrogenase domain-containing protein  46.36 
 
 
379 aa  329  4e-89  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.394739 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  42.74 
 
 
376 aa  330  4e-89  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_013730  Slin_5641  Butyryl-CoA dehydrogenase  45.65 
 
 
379 aa  329  5.0000000000000004e-89  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0132  acyl-CoA dehydrogenase domain protein  46.47 
 
 
376 aa  329  5.0000000000000004e-89  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  46.88 
 
 
386 aa  329  6e-89  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  43.78 
 
 
379 aa  329  6e-89  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  43.78 
 
 
379 aa  329  6e-89  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  45.26 
 
 
402 aa  328  7e-89  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  47.15 
 
 
381 aa  328  1.0000000000000001e-88  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  47.15 
 
 
381 aa  328  1.0000000000000001e-88  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  45.01 
 
 
381 aa  328  1.0000000000000001e-88  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_3108  acyl-CoA dehydrogenase domain protein  46.34 
 
 
380 aa  328  1.0000000000000001e-88  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_010676  Bphyt_5650  acyl-CoA dehydrogenase domain protein  45.38 
 
 
377 aa  328  1.0000000000000001e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0656  acyl-CoA dehydrogenase domain-containing protein  43.09 
 
 
380 aa  328  1.0000000000000001e-88  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  45.5 
 
 
382 aa  328  1.0000000000000001e-88  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  47.15 
 
 
381 aa  328  1.0000000000000001e-88  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  47.15 
 
 
381 aa  327  2.0000000000000001e-88  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4610  acyl-CoA dehydrogenase domain-containing protein  45.14 
 
 
379 aa  327  2.0000000000000001e-88  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000229425  n/a   
 
 
-
 
NC_009675  Anae109_2137  acyl-CoA dehydrogenase domain-containing protein  46.07 
 
 
382 aa  327  2.0000000000000001e-88  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.545271  normal  0.220827 
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  47.15 
 
 
381 aa  327  2.0000000000000001e-88  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  46.88 
 
 
381 aa  327  3e-88  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  46.88 
 
 
381 aa  327  3e-88  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  46.88 
 
 
381 aa  327  3e-88  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  46.88 
 
 
381 aa  327  3e-88  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  44.47 
 
 
382 aa  326  4.0000000000000003e-88  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  46.88 
 
 
381 aa  326  4.0000000000000003e-88  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_013132  Cpin_6291  acyl-CoA dehydrogenase domain protein  45.38 
 
 
379 aa  326  5e-88  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  43.21 
 
 
376 aa  326  5e-88  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  44.99 
 
 
379 aa  325  6e-88  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002950  PG1076  acyl-CoA dehydrogenase, short-chain specific  43.57 
 
 
379 aa  325  8.000000000000001e-88  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.228764 
 
 
-
 
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