Gene Haur_4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4610 
Symbol 
ID5736457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp5895351 
End bp5896490 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content50% 
IMG OID641281774 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001547369 
Protein GI159901122 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000229425 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTTCA AGCTCTCGGA CGATCAGGAA TTTATGCGTA AAGCGGCTCG CGAATTTGCC 
GAAGGTGAAA TTCGGGCAAC AGTTGCTGAG CGTGATGAGC ATAAAATTTG GCCGACTGAC 
ATTGTGCAAA AGATGGGCCA ATTGGGCTTT ATGGGCGTGG CGATCGATGA AGCCTACGGT 
GGAGCAGGCC TCGATTACGT TTCATATGCA ATTATGATCG AGGAGCTTTC ACGGGTTGAT 
GCCTCGGTTG GGGTCATTGC CTCGGTCAAT AATTCATTGG TATGTGCTGG GATTGAAAAA 
TTTGGCACTG AAGAACAAAA ACGTGATATC CTAGCCCCCT TGGCTAGTGG CCAAAAACTC 
GGCGCTTTCT CGCTCTCAGA GCCTGGCGCA GGCTCGGATG CGGCGGCCCA GAAAACCCGC 
GCTGTTGAAG ATGGCGATTA CTACATCATT ACGGGCACCA AAAACTGGGT TACCAATGGC 
TCAAAAGCCG ACACAATTTT GTTGATGACC ATGACTGCCC CAGAAAAAGG AGTCAAAGGC 
ATCACCGCAT TTTTAATTGA TACCCATGAG CCAGGCGTTT CAATCCTTAA GGTTGAAGAT 
AAATTGGGCA TTCGTTCGGC GCAATCGGCT CAAATGTCGT ATGATGGCTA TCGAGTGCAC 
AAAAGCCGCA TGCTCGGCCA ACCTGGCGAA GGCTTCAAAA TCGCTATGAC GATCTTGAAT 
GGTGGACGGA TTGGCATCGC CTCGCAGGCC TTGGGGATTG CCCAAGGAGC CTATGAAGCG 
GCCCTGGATT ATGCCAAAGT CCGCGAACAA TTTGGCCAAT CGATCATCAA TTTTCAAGCG 
GTGGGTTTTA CCTTAGCCGA TATGGCGACG CGAATTAAAG CTGCTCGGAT GTTGACCTAT 
CATGCGGCAT GGCTTAAAGA TCAGGGCGAG AATTATATTG CGGCGGCGGC GATGGCCAAA 
GTTTATGCCT CGGAAACCGC CATGTGGACA GCCACCAAAG CCGTGCAAAT CTTCGGCTCG 
AACGGCTACT CCAAAGAATA TCCGGTTGAA CGCTACTTCC GCGATGCCAA GATCACCGAA 
ATTTATGAAG GCACGAGTGA AATTCAACGC TTGGTAATTT CGCGCGAGAT TGCCAAATAA
 
Protein sequence
MDFKLSDDQE FMRKAAREFA EGEIRATVAE RDEHKIWPTD IVQKMGQLGF MGVAIDEAYG 
GAGLDYVSYA IMIEELSRVD ASVGVIASVN NSLVCAGIEK FGTEEQKRDI LAPLASGQKL 
GAFSLSEPGA GSDAAAQKTR AVEDGDYYII TGTKNWVTNG SKADTILLMT MTAPEKGVKG 
ITAFLIDTHE PGVSILKVED KLGIRSAQSA QMSYDGYRVH KSRMLGQPGE GFKIAMTILN 
GGRIGIASQA LGIAQGAYEA ALDYAKVREQ FGQSIINFQA VGFTLADMAT RIKAARMLTY 
HAAWLKDQGE NYIAAAAMAK VYASETAMWT ATKAVQIFGS NGYSKEYPVE RYFRDAKITE 
IYEGTSEIQR LVISREIAK