| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2867 |
|---|
| Symbol | |
|---|
| ID | 3712187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3307150 |
|---|
| End bp | 3308277 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Acyl-CoA dehydrogenase-like |
|---|
| Protein accession | YP_348598 |
|---|
| Protein GI | 77459092 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.967944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.115681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCCA ATGACGACCA ACAACAAATC CGCGACATGG CCCGGCAGTT TGCCGAGGAA
CGGCTCAAAC CGTTTGCCGC CGAGTGGGAT CGCGAGCACC GCTTTCCGAA AGAGGCCATC
GGCGAAATGG CCGGGCTGGG CTTCTTCGGC ATGCTGGTGC CGGAGCAGTG GGGCGGTTGC
GACACCGGTT ACCTGGCCTA CGCCATGGCC CTGGAAGAAA TCGCTGCCGG CGACGGCGCC
TGCTCGACGA TCATGAGCGT GCACAACTCG GTGGGTTGCG TGCCGATCCT CAAGTTCGGC
AACGACGACC AGCGCGAACG CTTCCTCAAG CCGCTGGCCA GCGGCGAGAT GCTCGGTGCT
TTCGCGTTGA CCGAACCTCA GGCCGGTTCC GATGCCAGCA GCCTGAAAAC CCGCGCGCGG
CTGGAAGGCG ATCACTACGT GCTCAACGGC TGCAAACAGT TCATCACTTC CGGGCAGAAC
GCCGGGATCG TGATCGTGTT TGCCGTGACT GATCCGAGTG CCGGCAAGCG CGGGATCAGC
GCGTTCATCG TGCCGACCGA CTCGCCGGGC TACAAAGTCG CACGCGTCGA AGACAAGCTC
GGCCAGCACG CCTCGGACAC CTGCCAGATT CTGTTCGAAG ACGTGAAAGT GCCGGTGGCC
AACCGGTTGG GCGAGGAGGG TGAGGGCTAC AAGATCGCTC TGGCCAACCT CGAAGGCGGC
CGTGTCGGTA TCGCTTCGCA ATCGGTGGGC ATGGCCCGCG CCGCGTTCGA AGCGGCACGC
GATTACGCCC GCGAACGCGA CACCTTCGGC AAGCCGATCA TCGAGCATCA GGCCGTGGCG
TTCCGCCTGG CGGACATGGC GACCCAGATC GCCGTGGCGC GGCAGATGGT GCATTACGCC
GCCGCCCTGC GCGACAGCGG TCAGCCAGCA CTGGTCGAGG CGTCGATGGC CAAACTGTTC
GCCTCGGAAA TGGCCGAGAA GGTCTGCTCC ATGGCCTTGC AAACCCTCGG CGGTTACGGT
TACCTCAACG ACTTCCCGCT GGAGCGCATC TACCGCGACG TGCGGGTCTG CCAGATCTAC
GAAGGCACCA GCGACATACA GCGCATGGTC ATTTCGCGCA ATCTTTGA
|
|---|
| Protein sequence | MIPNDDQQQI RDMARQFAEE RLKPFAAEWD REHRFPKEAI GEMAGLGFFG MLVPEQWGGC
DTGYLAYAMA LEEIAAGDGA CSTIMSVHNS VGCVPILKFG NDDQRERFLK PLASGEMLGA
FALTEPQAGS DASSLKTRAR LEGDHYVLNG CKQFITSGQN AGIVIVFAVT DPSAGKRGIS
AFIVPTDSPG YKVARVEDKL GQHASDTCQI LFEDVKVPVA NRLGEEGEGY KIALANLEGG
RVGIASQSVG MARAAFEAAR DYARERDTFG KPIIEHQAVA FRLADMATQI AVARQMVHYA
AALRDSGQPA LVEASMAKLF ASEMAEKVCS MALQTLGGYG YLNDFPLERI YRDVRVCQIY
EGTSDIQRMV ISRNL
|
|---|
| |