Gene Hmuk_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3108 
Symbol 
ID8412661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2984660 
End bp2985802 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content67% 
IMG OID645021455 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003178920 
Protein GI257389147 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTA CCCTCCCAGA CGAACACCGG ATGATTCGCG ATTCGGTCCG TGAGTTCTGT 
GCGGCCGAGA TCGAGCCCAT CGCCCAGGAG ATCGAGGACG AGCACCGCTT CCCCGCCGAG
ATCTTCGATC AGCTGGCCGA ACTCGACGTG ATGGGGGTCC CCATCGACGA GGAGTGGGGC
GGACTGGGCG GCGACCAGCT GATGTACGCC CTCGTGACGG AGGAACTGGG CCGAGTGTCC
GGCTCGATCG GGCTCTCCTA CGCAGCCCAC GTCTCGCTGG CCTCGAAGCC GATCGAGCTG
TTCGGCACGG ACGACCAGCG CGAGCGCTGG CTCCGGCCTC TGGCCGAGGG GGAGTATCTG
GGCGGCTGGG CGCTGACCGA GCCAGAGAGC GGGAGCGACG CCAGCGACAT GAGCACGACC
GCGACCAGAG AGGGCGACGA GTGGGTGCTT GACGGCACCA AGCAGTTCAT CACCAACGCC
TCGGTCGCCG GCTCGCTCGT CGTCAAGGCC GTCACCGAAC CGGACGCGGG CTACGACGGC
ATCTCGACCT TTCTCGTCGA TCCCGAGGCC GACGACGGAT TCGAAGTGAC GACGGAGTGG
GAGAAGATGG GCCTCAACGC CTCGCCGACC TGCGAGATCC GGTTCGACGA CTGCCGGATT
CCGGCAGACC GAATGCTGGG CGAGCCCGGC GACGGCTGGG AGCAGACGAA GAAGACGCTG
GACGGCGGGC GTATCTCGAT CGCCGCCCTC TCCGTGGGGC TTGCACAGGG CGCGTTCGAA
GCCGCCCTCG AATACGCGAA AGAGCGCGAA CAGTTCGGCC AGCCCATCGG CGAGTTCGAC
GCCGTCCGGG ACATGCTCGT CGAGATGGAC CGCAAGATCG AGCGGGCCAG ACTGCTGACC
CACAAGGCCG CCACGAAGTA CGATGCCGGC GAGGACGTGG GACGGCTCTC CTCGATGGCG
AAACTCGACG CCAGCGAGAT CTGCCGGGAG GTCGCCGAGG ACGCCGTCCA GGTGCTCGGG
GGCTACGGCT ACACGACCGA CTTCGCACCC CAGCGGTTCT ACCGCGACGC CAAGCTGATG
GAGATCGGCG AGGGAACCAG CGAGATCCAG CGGCTCGTAC TGGGACGGGA ACTGGGGCTG
TAG
 
Protein sequence
MDFTLPDEHR MIRDSVREFC AAEIEPIAQE IEDEHRFPAE IFDQLAELDV MGVPIDEEWG 
GLGGDQLMYA LVTEELGRVS GSIGLSYAAH VSLASKPIEL FGTDDQRERW LRPLAEGEYL
GGWALTEPES GSDASDMSTT ATREGDEWVL DGTKQFITNA SVAGSLVVKA VTEPDAGYDG
ISTFLVDPEA DDGFEVTTEW EKMGLNASPT CEIRFDDCRI PADRMLGEPG DGWEQTKKTL
DGGRISIAAL SVGLAQGAFE AALEYAKERE QFGQPIGEFD AVRDMLVEMD RKIERARLLT
HKAATKYDAG EDVGRLSSMA KLDASEICRE VAEDAVQVLG GYGYTTDFAP QRFYRDAKLM
EIGEGTSEIQ RLVLGRELGL