| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2715 |
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| Symbol | |
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| ID | 4174475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3308993 |
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| End bp | 3310168 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055733 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_662281 |
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| Protein GI | 109899026 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.785448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG CATGGTCAAA AGAAGATGAG TCAGGGATCA TAGACATGAT CGATAAATGG
GTTGAGAACG ACGTTCGCCC CATCGCTAAA GAATATGATC AAGAAGACAA ATACCCTCAT
GCACTGGCTG AGCAAATGAA AGAGCTAGGC TTGTTTGGTG CCACCATCGG CCAAGCGTAT
GGTGGGCTAG GTTTGCCTGC GTCGATATAC GCCAAAATCG TGATGAAAGT GGCATCAGCC
TGGATGGCTC CTAGCGGCAT CTTTAATTCA CATTTGATTC AAGCTTCAGC CATTGAGCGC
TGCGGTACTC AGGCACAAAA AGAACGCTTC TTGCCATTGA TGGCCACTGG TGAATTACGT
GGCGGGGTGG CTTTGACTGA GCCAAATGCA GGCACGGATT TACAAGCCAT ACGCACAACT
GCAGTGAAAG ATGGCGATGA TTACATCATT AATGGGGCAA AAACCTGGAT CACCAATTCC
CTAAACGGTA ATTCACTTGC TGTACTGGTG AAAACAGACC TTGATGCGGT GCCAGCACAT
ACCGGCACCA GTATGTTTAT CGTTGAAACG AAAGATGAAA ACGGCGAATT CAAAGCCGGC
ATCACCGTAT CAAAAATGAA AAAGCTCGGT TATCGCTCCA TCGATACCTG TGAAGTCGTA
TTTGAAAACG TACGTGTCCC GGCAGCTAAT TTAGTCGGTG AAAAAGAAGG TTCAGGCTTT
AAACACGCTA TTGGCGGCCT TGAACTTGGG CGTATTAACG TAGCTGCGCG TGGTGCGGGC
ATTGCCAGAG GCGCCACTGA GTTAGCGGTG CGCTACGCAC AAGAGCGTGA AACCTTCGGT
AAAGCTATCT GCCAACATCA GGCTATTCAG CTCAAGTTGG GCGAAATGGC CACGCAAGTG
GAAGCCGCGC GTTTGTTGAT TGAACAAGCC GCCGCCAAAT ACGATGCGAA TGAGCGATGT
GATATGGAAG CGGGCATGGC GAAATACTTT GGCTCTGAAG CTGGGGTATT TTGTGCCAAC
GAAGCTATGC GTATTTTTGG CGGGTACAGC TACTCAGTGG AATACGATAT CGAGCGTTAC
TATCGAGATG CCATGTTGAT GTGTATCGGC GAGGGCACCA ATGAAATGCA GCGCATTATT
ATTGCCAAAC AAATCATCGA TAAAAACAAA ATCTAA
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| Protein sequence | MSEAWSKEDE SGIIDMIDKW VENDVRPIAK EYDQEDKYPH ALAEQMKELG LFGATIGQAY
GGLGLPASIY AKIVMKVASA WMAPSGIFNS HLIQASAIER CGTQAQKERF LPLMATGELR
GGVALTEPNA GTDLQAIRTT AVKDGDDYII NGAKTWITNS LNGNSLAVLV KTDLDAVPAH
TGTSMFIVET KDENGEFKAG ITVSKMKKLG YRSIDTCEVV FENVRVPAAN LVGEKEGSGF
KHAIGGLELG RINVAARGAG IARGATELAV RYAQERETFG KAICQHQAIQ LKLGEMATQV
EAARLLIEQA AAKYDANERC DMEAGMAKYF GSEAGVFCAN EAMRIFGGYS YSVEYDIERY
YRDAMLMCIG EGTNEMQRII IAKQIIDKNK I
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