More than 300 homologs were found in PanDaTox collection
for query gene Mpal_1354 on replicon NC_011832
Organism: Methanosphaerula palustris E1-9c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011832  Mpal_1354  binding-protein-dependent transport systems inner membrane component  100 
 
 
204 aa  383  1e-105  Methanosphaerula palustris E1-9c  Archaea  normal  0.459118  normal  0.684309 
 
 
-
 
NC_007955  Mbur_0486  ABC proline/glycine betaine transporter, inner membrane subunit  52.55 
 
 
203 aa  198  5e-50  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00597716  n/a   
 
 
-
 
NC_011898  Ccel_3333  Substrate-binding region of ABC-type glycine betaine transport system  44.86 
 
 
524 aa  157  8e-38  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000937167  n/a   
 
 
-
 
NC_013517  Sterm_1515  Substrate-binding region of ABC-type glycine betaine transport system  44.2 
 
 
526 aa  155  5.0000000000000005e-37  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0692577  n/a   
 
 
-
 
NC_010320  Teth514_1202  binding-protein-dependent transport systems inner membrane component  40.84 
 
 
212 aa  152  5e-36  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0119  substrate-binding region of ABC-type glycine betaine transport system  44.32 
 
 
523 aa  145  3e-34  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000124345  n/a   
 
 
-
 
NC_012793  GWCH70_0296  binding-protein-dependent transport systems inner membrane component  40.51 
 
 
211 aa  144  6e-34  Geobacillus sp. WCH70  Bacteria  normal  0.4946  n/a   
 
 
-
 
NC_013411  GYMC61_1174  binding-protein-dependent transport systems inner membrane component  40.41 
 
 
209 aa  140  9.999999999999999e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009727  CBUD_1923  glycine betaine transport system permease protein  36.7 
 
 
526 aa  138  7e-32  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0538  glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein  43.46 
 
 
517 aa  136  2e-31  Clostridium perfringens ATCC 13124  Bacteria  normal  0.863672  n/a   
 
 
-
 
NC_008262  CPR_0522  glycine betaine/carnitine/choline ABC transporter, permease/substrate-binding protein  43.46 
 
 
517 aa  136  2e-31  Clostridium perfringens SM101  Bacteria  normal  0.271995  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0267  quaternary amine ABC transporter periplasmic substrate-binding protein  37.57 
 
 
526 aa  136  3.0000000000000003e-31  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2030  amino acid ABC transporter, permease protein  34.67 
 
 
211 aa  131  6e-30  Staphylococcus epidermidis RP62A  Bacteria  normal  0.207242  n/a   
 
 
-
 
NC_013745  Htur_4755  binding-protein-dependent transport systems inner membrane component  39.58 
 
 
224 aa  130  1.0000000000000001e-29  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_013730  Slin_0317  binding-protein-dependent transport systems inner membrane component  38.74 
 
 
519 aa  128  5.0000000000000004e-29  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.417886 
 
 
-
 
NC_013132  Cpin_4963  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
522 aa  127  8.000000000000001e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0875398  normal  0.252786 
 
 
-
 
NC_013745  Htur_4757  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
228 aa  127  1.0000000000000001e-28  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_004116  SAG0243  amino acid ABC transporter, permease protein  34.57 
 
 
211 aa  126  2.0000000000000002e-28  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5106  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
220 aa  122  3e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.485727  normal  0.10095 
 
 
-
 
NC_002976  SERP2357  amino acid ABC transporter, permease protein  32.49 
 
 
211 aa  121  6e-27  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3032  Substrate-binding region of ABC-type glycine betaine transport system  30.32 
 
 
531 aa  121  7e-27  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.367999  n/a   
 
 
-
 
NC_009632  SaurJH1_2522  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
211 aa  120  9.999999999999999e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.241712  n/a   
 
 
-
 
NC_009487  SaurJH9_2474  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
211 aa  120  9.999999999999999e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.13842  n/a   
 
 
-
 
NC_002976  SERP0386  ABC transporter, permease protein  38.62 
 
 
504 aa  119  3e-26  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1686  binding-protein dependent transport system inner membrane protein  36.32 
 
 
207 aa  119  3e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.038351  normal  0.407571 
 
 
-
 
NC_010003  Pmob_1127  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
216 aa  119  3e-26  Petrotoga mobilis SJ95  Bacteria  normal  0.721959  n/a   
 
 
-
 
NC_009632  SaurJH1_0763  substrate-binding region of ABC-type glycine betaine transport system  40.43 
 
 
504 aa  119  3.9999999999999996e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.458546  n/a   
 
 
-
 
NC_009487  SaurJH9_0746  substrate-binding region of ABC-type glycine betaine transport system  40.43 
 
 
504 aa  119  3.9999999999999996e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0801  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
216 aa  118  6e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.435209 
 
 
-
 
NC_011830  Dhaf_2803  binding-protein-dependent transport systems inner membrane component  39.09 
 
 
218 aa  118  7e-26  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000135531  n/a   
 
 
-
 
NC_008527  LACR_0914  choline ABC transporter permease and substrate binding protein  37.97 
 
 
500 aa  118  7e-26  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.222381  n/a   
 
 
-
 
NC_013037  Dfer_1250  binding-protein-dependent transport systems inner membrane component  38.27 
 
 
525 aa  118  7.999999999999999e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.615651  normal  0.522042 
 
 
-
 
NC_007644  Moth_1687  binding-protein dependent transport system inner membrane protein  36 
 
 
216 aa  116  1.9999999999999998e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.296166  normal  0.403449 
 
 
-
 
NC_013204  Elen_0084  Substrate-binding region of ABC-type glycine betaine transport system  37.5 
 
 
528 aa  115  3e-25  Eggerthella lenta DSM 2243  Bacteria  normal  0.689632  normal 
 
 
-
 
NC_007347  Reut_A2494  binding-protein dependent transport system inner membrane protein  34.65 
 
 
216 aa  116  3e-25  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1605  binding-protein-dependent transport systems inner membrane component  37.57 
 
 
236 aa  115  5e-25  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1664  binding-protein-dependent transport systems inner membrane component  37.57 
 
 
236 aa  115  5e-25  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1845  binding-protein-dependent transport systems inner membrane component  37.57 
 
 
236 aa  115  5e-25  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.309897  normal 
 
 
-
 
NC_011149  SeAg_B1678  binding-protein-dependent transport systems inner membrane component  37.57 
 
 
236 aa  115  5e-25  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.122529  n/a   
 
 
-
 
NC_011094  SeSA_A1596  binding-protein-dependent transport systems inner membrane component  37.57 
 
 
236 aa  115  5e-25  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.82645  normal  0.733145 
 
 
-
 
NC_009436  Ent638_1924  binding-protein-dependent transport systems inner membrane component  37.36 
 
 
245 aa  115  6e-25  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0769  binding-protein-dependent transport systems inner membrane component  42 
 
 
245 aa  114  7.999999999999999e-25  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1451  binding-protein dependent transport system inner membrane protein  41.57 
 
 
493 aa  114  8.999999999999998e-25  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1155  binding-protein-dependent transport systems inner membrane component  41.45 
 
 
213 aa  114  1.0000000000000001e-24  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5104  binding-protein-dependent transport systems inner membrane component  37.95 
 
 
251 aa  112  3e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.245299 
 
 
-
 
NC_008254  Meso_2980  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
211 aa  112  4.0000000000000004e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2912  binding-protein-dependent transport systems inner membrane component  39.06 
 
 
250 aa  111  6e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105441 
 
 
-
 
NC_004116  SAG2130  amino acid ABC transporter, amino acid-binding protein/permease protein  33.17 
 
 
504 aa  109  3e-23  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2355  binding-protein-dependent transport systems inner membrane component  36.41 
 
 
243 aa  108  7.000000000000001e-23  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0118  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
216 aa  107  1e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3373  Substrate-binding region of ABC-type glycine betaine transport system  38.8 
 
 
489 aa  107  1e-22  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2784  Substrate-binding region of ABC-type glycine betaine transport system  41.76 
 
 
504 aa  107  1e-22  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2944  binding-protein-dependent transport systems inner membrane component  36.6 
 
 
400 aa  106  2e-22  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.543286  n/a   
 
 
-
 
NC_011145  AnaeK_3299  Substrate-binding region of ABC-type glycine betaine transport system  37.89 
 
 
490 aa  106  3e-22  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001529  probable inner-membrane permease  32.98 
 
 
199 aa  106  3e-22  Vibrio sp. Ex25  Bacteria  normal  0.90895  n/a   
 
 
-
 
NC_013515  Smon_0574  Substrate-binding region of ABC-type glycine betaine transport system  35 
 
 
503 aa  105  4e-22  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008530  LGAS_0705  ABC-type proline/glycine betaine transport system, permease and substrate binding protein  38.01 
 
 
516 aa  105  4e-22  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.000153769  normal 
 
 
-
 
NC_010465  YPK_2864  binding-protein-dependent transport systems inner membrane component  34.52 
 
 
384 aa  105  5e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2353  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
220 aa  105  5e-22  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2785  quaternary amine ABC transporter permease  34.52 
 
 
384 aa  105  5e-22  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1598  substrate-binding region of ABC-type glycine betaine transport system  36.81 
 
 
516 aa  105  5e-22  Cupriavidus metallidurans CH34  Bacteria  normal  0.144217  normal 
 
 
-
 
NC_010159  YpAngola_A1330  quaternary amine ABC transporter permease  34.52 
 
 
384 aa  105  5e-22  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2379  Substrate-binding region of ABC-type glycine betaine transport system  40.84 
 
 
518 aa  105  6e-22  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0770  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
222 aa  104  9e-22  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2914  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
220 aa  104  1e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.208767 
 
 
-
 
NC_008688  Pden_4887  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
240 aa  103  2e-21  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_1446  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
386 aa  103  2e-21  Serratia proteamaculans 568  Bacteria  normal  0.706116  normal 
 
 
-
 
NC_013440  Hoch_5205  Substrate-binding region of ABC-type glycine betaine transport system  35.86 
 
 
537 aa  103  2e-21  Haliangium ochraceum DSM 14365  Bacteria  normal  0.057164  normal 
 
 
-
 
NC_009972  Haur_0352  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
212 aa  102  5e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00133912  n/a   
 
 
-
 
NC_008062  Bcen_5737  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
217 aa  102  5e-21  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6101  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
217 aa  102  5e-21  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6583  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
217 aa  102  6e-21  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0902932  normal  0.0101515 
 
 
-
 
NC_005957  BT9727_2064  glycine betaine/choline ABC transporter, ATP-binding protein  39.5 
 
 
503 aa  101  9e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.508054  n/a   
 
 
-
 
NC_006274  BCZK2060  glycine betaine/choline ABC transporter, ATP-binding protein  39.5 
 
 
503 aa  101  9e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2306  glycine betaine/L-proline ABC transporter, permease and substrate-binding protein  39.5 
 
 
503 aa  101  9e-21  Bacillus cereus AH820  Bacteria  n/a    normal  0.816481 
 
 
-
 
NC_010184  BcerKBAB4_2100  substrate-binding region of ABC-type glycine betaine transport system  38.5 
 
 
503 aa  100  1e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0700074  n/a   
 
 
-
 
NC_009513  Lreu_0185  binding-protein-dependent transport systems inner membrane component  32.8 
 
 
221 aa  100  1e-20  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2126  glycine betaine/L-proline ABC transporter permease  39.5 
 
 
503 aa  101  1e-20  Bacillus anthracis str. Sterne  Bacteria  normal  0.887969  n/a   
 
 
-
 
NC_011772  BCG9842_B3062  glycine betaine/L-proline ABC transporter, permease and substrate-binding protein  39 
 
 
503 aa  100  1e-20  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0540  ABC transporter inner membrane/substrate-binding proteins  33.16 
 
 
501 aa  100  1e-20  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2390  glycine betaine/L-proline ABC transporter, permease and substrate-binding protein  40.54 
 
 
503 aa  100  1e-20  Bacillus cereus AH187  Bacteria  normal  0.114171  n/a   
 
 
-
 
NC_007509  Bcep18194_C7552  ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit  32.49 
 
 
217 aa  100  1e-20  Burkholderia sp. 383  Bacteria  normal  normal  0.542589 
 
 
-
 
NC_007530  GBAA_2280  glycine betaine/L-proline ABC transporter permease protein  39.5 
 
 
503 aa  101  1e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.578491  n/a   
 
 
-
 
NC_011725  BCB4264_A2263  glycine betaine/L-proline ABC transporter, permease and substrate-binding protein  39 
 
 
503 aa  100  1e-20  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2215  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
282 aa  100  2e-20  Pseudomonas putida F1  Bacteria  normal  0.636525  normal 
 
 
-
 
NC_007948  Bpro_1156  binding-protein-dependent transport systems inner membrane component  32.65 
 
 
207 aa  99.8  2e-20  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2362  binding-protein-dependent transport systems inner membrane component  37.44 
 
 
282 aa  99.8  2e-20  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4031  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
205 aa  99.8  2e-20  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00343198 
 
 
-
 
NC_008347  Mmar10_1070  substrate-binding region of ABC-type glycine betaine transport system  37.22 
 
 
525 aa  100  2e-20  Maricaulis maris MCS10  Bacteria  normal  0.019749  normal 
 
 
-
 
NC_002947  PP_3559  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
299 aa  99.8  3e-20  Pseudomonas putida KT2440  Bacteria  normal  0.873064  normal 
 
 
-
 
NC_003909  BCE_2314  glycine betaine/L-proline ABC transporter, permease protein, putative  39 
 
 
503 aa  99.8  3e-20  Bacillus cereus ATCC 10987  Bacteria  normal  0.0653078  n/a   
 
 
-
 
NC_003295  RSc2516  putative lipoprotein transmembrane  38.58 
 
 
520 aa  99  4e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  0.2714  hitchhiker  0.00948908 
 
 
-
 
NC_007952  Bxe_B2995  glycine betaine/choline/proline ABC transporter inner membrane protein  36.16 
 
 
238 aa  99  4e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2946  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
255 aa  99  4e-20  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0159646  n/a   
 
 
-
 
NC_009380  Strop_1636  binding-protein-dependent transport systems inner membrane component  38.24 
 
 
242 aa  98.6  6e-20  Salinispora tropica CNB-440  Bacteria  normal  normal  0.537762 
 
 
-
 
NC_009656  PSPA7_1216  ABC transporter permease  34.07 
 
 
220 aa  98.2  7e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2050  binding-protein-dependent transport systems inner membrane component  37.31 
 
 
258 aa  97.4  1e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3625  binding-protein-dependent transport systems inner membrane component  36.13 
 
 
383 aa  97.4  1e-19  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0120  binding-protein-dependent transport systems inner membrane component  37.58 
 
 
281 aa  96.7  2e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1223  Substrate-binding region of ABC-type glycine betaine transport system  36.87 
 
 
512 aa  96.7  2e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
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