| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5205 |
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| Symbol | |
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| ID | 8547617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7158887 |
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| End bp | 7160500 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646389880 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_003269584 |
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| Protein GI | 262198375 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.057164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCCGA TCTTTGCAAC CCAGCTCGAG CGCCTGCCCG CGCTGCTCGG GGCGCACATC
GTGCTCACGG TCATCGCCCT GGCGCTGGGC CTGGCCATCT CGCTGCCGGC CGCGTTCCTG
GGGCTGCGCC AGCGCGCCCT GCAGGGGCCG CTGCTGGCGG TGGCGAGCAT CATCCAGACC
ATCCCCAGCC TGGCGATTCT GGCGCTGATG GTGGCCGCGT TCGGGCTTTT CGGACAGCCG
GCCGCGCTCA TCGCGCTCAC CGCCTACAGC GTGCTGCCGA TCCTGCGCAA CACCATCACC
GGCATCGAGG GCGTGGACCC GGCCGCGGTC GAGGCCGCGC GCGGCATCGG CATGACCCGC
AACCAGATCC TGTGGCGGGT GCAGTTGCCG CTGGCCGCGC CCATCATCCT CGCCGGTATC
CGCACCGCCA CGGTGTGGGT GGTCGGCATC GCCACGCTGG CCACGCCCGT GGGCGCCGAC
TCGCTGGGCA GCTACATCTT CGGCGGCCTG CAGACGCGCA ACACCACGGC CGTGCTGTTC
GGCGTGGTAT CGGCGGCGGC GCTGGCCATC GCGCTGGACT CGCTGATCCA CCTGGGCGAG
GTCGCCGCGC GCAAGCGCTC GCGGCCGCTG GCGCTCATCA CCGCCGTGGG CCTGGCCCTC
ATCCTGGCCA TGGGCGTGTG GCCCAAGGGC GGCGACGAGC GCGTGATGGC GGCCGCGCCC
ACGGCCGCGG CGCAGGCCGA GGGCGTCGAG GCCGCGCCGA GGCGCACCGT GATGGTCGGC
GCCAAGACCT TCACCGAGAG CTATATCCTG GCCCGGCTCA TCCGCGCGCG GCTGAGCGAG
GCCGGCTATC CCGCCCAGCT CAAAGAGGGG CTGGGATCGG CCGTGGTCTT CGATGCGCTG
CGCCAGGGCG AGATCGACGT GTACGTCGAT TACTCGGGCA CCATCTGGGC CAACGCCATG
AAGCGCACCG AGACGCTGCC GCCGCAGGAG GTTCTCGACC AGATGTCCGA GTGGCTCGAG
CGCGAGCACG AGATGAAGAG TCTGGGCGCG CTCGGCTTCG AGAACGCCTA CGGCCTGGCC
CTGCGCGAGG ACGCGGCCGC CGAGCTCGGG GTCGATACCA TCTCCGAGCT GGTGCCGCAC
ACGCCCAAGC TGTCGCTGGG CTCGGACTTC GAGTTCTTCG ACCGGCCGGA GTGGACCAAG
CTGCGCGACA CCTACGGGCT GGCGTTCGAC GCCCAGCGCG CGTTCGACCC CACCCTGATG
TATCCGGCGG TCAAAGAGGG CGACGTCGAC GTGATCACGG CCTTCACCAC CGACGGCCGC
ATCGCGGCCT TCAACCTGCG CGTGCTGCCC GATGACAAAC ACGCCTTCCC GCCCTACGAC
GCGGTGCTGC TGCTCAGCCC CGAGGCGTCC AAGGATCCGG ATCTCATCGC CGCGCTCGCG
CCGCTCATCG GCGCCATCGA CAGCGACGCC ATGCGCACGG CCAACAAGCT GGTCGACGTC
GACCGCAAGG ATACGCAGTT CGCGGCCCAG TATCTGCTCG ACCGGATCGC GGCGGGCGAC
GACGCCCAAC CGGCCGCCGA CGACACCGCC GAGTCAGCCG CGGACGGCGA GTAG
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| Protein sequence | MSPIFATQLE RLPALLGAHI VLTVIALALG LAISLPAAFL GLRQRALQGP LLAVASIIQT
IPSLAILALM VAAFGLFGQP AALIALTAYS VLPILRNTIT GIEGVDPAAV EAARGIGMTR
NQILWRVQLP LAAPIILAGI RTATVWVVGI ATLATPVGAD SLGSYIFGGL QTRNTTAVLF
GVVSAAALAI ALDSLIHLGE VAARKRSRPL ALITAVGLAL ILAMGVWPKG GDERVMAAAP
TAAAQAEGVE AAPRRTVMVG AKTFTESYIL ARLIRARLSE AGYPAQLKEG LGSAVVFDAL
RQGEIDVYVD YSGTIWANAM KRTETLPPQE VLDQMSEWLE REHEMKSLGA LGFENAYGLA
LREDAAAELG VDTISELVPH TPKLSLGSDF EFFDRPEWTK LRDTYGLAFD AQRAFDPTLM
YPAVKEGDVD VITAFTTDGR IAAFNLRVLP DDKHAFPPYD AVLLLSPEAS KDPDLIAALA
PLIGAIDSDA MRTANKLVDV DRKDTQFAAQ YLLDRIAAGD DAQPAADDTA ESAADGE
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