Gene Nther_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0118 
Symbol 
ID6315517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp141500 
End bp142150 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content34% 
IMG OID642642496 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001916305 
Protein GI188584760 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATTA GCACCTCTAT ATTAGAGTTT TGGCAGTATT TAGTTGACCG GCAGGATATG 
TTTTTGAATT TATTTTACGA GCACACTCGA TTAATTTTAA TTACTGCTAT TATATCGATA
ATTATTGGTG TTATTTTGGG GTTGGTTTCT ACTTATTATA AAAGTTTAGC AAACATAATT
TTGACTGTAA CTCAAATTCT AATGACAATT CCTAGTTTGG CTATGATTGC TATTATTTTC
CCATTGTTTG GTATAGGTCC AACGACAGGT ATAGTAGCCT TAGTGCTTTA CTCTTTATTA
CCTATAGTTA GAAATACTTA TACTGGTATA AACGAACTCG ATGCTAACGT ATTGGAAGCA
GCTAAAGGTA TGGGGATGTC GGAGAGAAAA ATATTACTGA AAATCAAAAT ACCTTTAGCA
TTACCTGTAA TAATTGCAGG AATCCGAACA GCTGTTGTAA TGGTAGTAGG TATTGGAGCA
ATCGCTAGCT TGATAGGTGC TGGAGGATTA GGTGATTTTA TTTTTAGAGG TATATCTAGG
GATTTCCCGT TTATGATTTT AGCTGGTGCT ATTGGAGTAT CAATATTGGC AATAGCTTTA
GATTTACTCC TTAGTTGGCT AGAACAAAAG GTGATAGCGA GACAAAGTTA A
 
Protein sequence
MGISTSILEF WQYLVDRQDM FLNLFYEHTR LILITAIISI IIGVILGLVS TYYKSLANII 
LTVTQILMTI PSLAMIAIIF PLFGIGPTTG IVALVLYSLL PIVRNTYTGI NELDANVLEA
AKGMGMSERK ILLKIKIPLA LPVIIAGIRT AVVMVVGIGA IASLIGAGGL GDFIFRGISR
DFPFMILAGA IGVSILAIAL DLLLSWLEQK VIARQS