More than 300 homologs were found in PanDaTox collection
for query gene Bxe_B2995 on replicon NC_007952
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007952  Bxe_B2995  glycine betaine/choline/proline ABC transporter inner membrane protein  100 
 
 
238 aa  457  9.999999999999999e-129  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_5735  binding-protein-dependent transport systems inner membrane component  75.32 
 
 
238 aa  342  2e-93  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.224143  n/a   
 
 
-
 
NC_008544  Bcen2424_6099  binding-protein-dependent transport systems inner membrane component  75.32 
 
 
238 aa  342  2e-93  Burkholderia cenocepacia HI2424  Bacteria  normal  0.840273  normal 
 
 
-
 
NC_010512  Bcenmc03_6581  binding-protein-dependent transport systems inner membrane component  74.89 
 
 
238 aa  342  4e-93  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.191415  normal  0.0371863 
 
 
-
 
NC_007509  Bcep18194_C7550  ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit  73.62 
 
 
238 aa  337  7e-92  Burkholderia sp. 383  Bacteria  normal  0.93042  normal  0.508329 
 
 
-
 
NC_009656  PSPA7_1218  ABC transporter permease  73.26 
 
 
240 aa  251  9.000000000000001e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_13610  ABC transporter permease  70.87 
 
 
240 aa  249  3e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0806  binding-protein dependent transport system inner membrane protein  65.49 
 
 
238 aa  248  8e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.674901 
 
 
-
 
NC_009512  Pput_0901  binding-protein-dependent transport systems inner membrane component  63.09 
 
 
237 aa  247  1e-64  Pseudomonas putida F1  Bacteria  normal  normal  0.229309 
 
 
-
 
NC_002947  PP_0871  binding-protein-dependent transport systems inner membrane component  65.91 
 
 
247 aa  246  2e-64  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4252  binding-protein dependent transport system inner membrane protein  66.81 
 
 
237 aa  246  2e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4578  glycine betaine/carnitine/choline ABC transporter, permease protein  66.37 
 
 
237 aa  245  3e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0915  binding-protein-dependent transport systems inner membrane component  65.9 
 
 
237 aa  246  3e-64  Pseudomonas putida GB-1  Bacteria  normal  0.144284  normal  0.229592 
 
 
-
 
NC_011149  SeAg_B1678  binding-protein-dependent transport systems inner membrane component  56.7 
 
 
236 aa  236  2e-61  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.122529  n/a   
 
 
-
 
NC_011205  SeD_A1845  binding-protein-dependent transport systems inner membrane component  56.7 
 
 
236 aa  236  2e-61  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.309897  normal 
 
 
-
 
NC_011094  SeSA_A1596  binding-protein-dependent transport systems inner membrane component  56.7 
 
 
236 aa  236  2e-61  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.82645  normal  0.733145 
 
 
-
 
NC_011080  SNSL254_A1605  binding-protein-dependent transport systems inner membrane component  56.7 
 
 
236 aa  236  2e-61  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1664  binding-protein-dependent transport systems inner membrane component  56.7 
 
 
236 aa  236  2e-61  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1924  binding-protein-dependent transport systems inner membrane component  54.78 
 
 
245 aa  236  3e-61  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4307  binding-protein-dependent transport systems inner membrane component  65 
 
 
237 aa  233  1.0000000000000001e-60  Pseudomonas putida W619  Bacteria  normal  0.530017  normal  0.591477 
 
 
-
 
NC_007973  Rmet_0799  binding-protein-dependent transport systems inner membrane component  63.35 
 
 
238 aa  216  2e-55  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.413822 
 
 
-
 
NC_007347  Reut_A2496  binding-protein dependent transport system inner membrane protein  60.42 
 
 
238 aa  213  1.9999999999999998e-54  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2355  binding-protein-dependent transport systems inner membrane component  54.41 
 
 
243 aa  207  9e-53  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5104  binding-protein-dependent transport systems inner membrane component  52 
 
 
251 aa  198  7.999999999999999e-50  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.245299 
 
 
-
 
NC_008786  Veis_2912  binding-protein-dependent transport systems inner membrane component  53 
 
 
250 aa  193  3e-48  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105441 
 
 
-
 
NC_013457  VEA_001531  putative ABC transporter permease  48.91 
 
 
244 aa  186  4e-46  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_4887  binding-protein-dependent transport systems inner membrane component  55.08 
 
 
240 aa  182  6e-45  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0769  binding-protein-dependent transport systems inner membrane component  46.9 
 
 
245 aa  172  5e-42  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2246  binding-protein-dependent transport systems inner membrane component  48.37 
 
 
243 aa  167  1e-40  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0455559  normal 
 
 
-
 
NC_007973  Rmet_0801  binding-protein-dependent transport systems inner membrane component  40.87 
 
 
216 aa  150  2e-35  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.435209 
 
 
-
 
NC_007347  Reut_A2494  binding-protein dependent transport system inner membrane protein  39.9 
 
 
216 aa  147  1.0000000000000001e-34  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0296  binding-protein-dependent transport systems inner membrane component  47.75 
 
 
211 aa  144  2e-33  Geobacillus sp. WCH70  Bacteria  normal  0.4946  n/a   
 
 
-
 
NC_004116  SAG0243  amino acid ABC transporter, permease protein  42.63 
 
 
211 aa  142  4e-33  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0317  binding-protein-dependent transport systems inner membrane component  44.56 
 
 
519 aa  142  5e-33  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.417886 
 
 
-
 
NC_013411  GYMC61_1174  binding-protein-dependent transport systems inner membrane component  45.11 
 
 
209 aa  141  7e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007963  Csal_2353  binding-protein-dependent transport systems inner membrane component  45.86 
 
 
220 aa  141  8e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2993  ABC glycine betaine/L-proline transporter, inner membrane subunit  40.91 
 
 
217 aa  141  9.999999999999999e-33  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0770  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
222 aa  140  1.9999999999999998e-32  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1250  binding-protein-dependent transport systems inner membrane component  46.59 
 
 
525 aa  137  2e-31  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.615651  normal  0.522042 
 
 
-
 
NC_007509  Bcep18194_C7552  ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit  38.86 
 
 
217 aa  136  4e-31  Burkholderia sp. 383  Bacteria  normal  normal  0.542589 
 
 
-
 
NC_004310  BR0222  ABC transporter, permease protein  38.61 
 
 
248 aa  135  5e-31  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0213  ABC transporter, permease protein  38.61 
 
 
248 aa  135  5e-31  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6583  binding-protein-dependent transport systems inner membrane component  38.86 
 
 
217 aa  135  7.000000000000001e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0902932  normal  0.0101515 
 
 
-
 
NC_008062  Bcen_5737  binding-protein-dependent transport systems inner membrane component  38.86 
 
 
217 aa  135  8e-31  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6101  binding-protein-dependent transport systems inner membrane component  38.86 
 
 
217 aa  135  8e-31  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2803  binding-protein-dependent transport systems inner membrane component  45 
 
 
218 aa  135  8e-31  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000135531  n/a   
 
 
-
 
NC_010003  Pmob_1127  binding-protein-dependent transport systems inner membrane component  40.44 
 
 
216 aa  134  9.999999999999999e-31  Petrotoga mobilis SJ95  Bacteria  normal  0.721959  n/a   
 
 
-
 
NC_013457  VEA_001529  probable inner-membrane permease  42.31 
 
 
199 aa  134  1.9999999999999998e-30  Vibrio sp. Ex25  Bacteria  normal  0.90895  n/a   
 
 
-
 
NC_002976  SERP0386  ABC transporter, permease protein  44.86 
 
 
504 aa  132  6.999999999999999e-30  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0804  binding-protein dependent transport system inner membrane protein  39.42 
 
 
217 aa  131  7.999999999999999e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.141523  normal  0.643445 
 
 
-
 
NC_010117  COXBURSA331_A0267  quaternary amine ABC transporter periplasmic substrate-binding protein  44.51 
 
 
526 aa  131  9e-30  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0763  substrate-binding region of ABC-type glycine betaine transport system  46.33 
 
 
504 aa  131  1.0000000000000001e-29  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.458546  n/a   
 
 
-
 
NC_009487  SaurJH9_0746  substrate-binding region of ABC-type glycine betaine transport system  46.33 
 
 
504 aa  131  1.0000000000000001e-29  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5106  binding-protein-dependent transport systems inner membrane component  38 
 
 
220 aa  130  2.0000000000000002e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.485727  normal  0.10095 
 
 
-
 
NC_004578  PSPTO_4576  glycine betaine/choline OpuC ABC transporter, permease protein  39.13 
 
 
217 aa  130  2.0000000000000002e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.28564  n/a   
 
 
-
 
NC_007005  Psyr_4250  binding-protein dependent transport system inner membrane protein  39.13 
 
 
217 aa  130  2.0000000000000002e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0899  binding-protein-dependent transport systems inner membrane component  43.17 
 
 
217 aa  130  2.0000000000000002e-29  Pseudomonas putida F1  Bacteria  normal  normal  0.334865 
 
 
-
 
NC_002947  PP_0869  binding-protein-dependent transport systems inner membrane component  43.17 
 
 
217 aa  129  3e-29  Pseudomonas putida KT2440  Bacteria  normal  0.476701  normal 
 
 
-
 
NC_009727  CBUD_1923  glycine betaine transport system permease protein  43.17 
 
 
526 aa  129  3e-29  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0913  binding-protein-dependent transport systems inner membrane component  43.17 
 
 
217 aa  129  3e-29  Pseudomonas putida GB-1  Bacteria  normal  0.0471991  normal  0.178829 
 
 
-
 
NC_010501  PputW619_4309  binding-protein-dependent transport systems inner membrane component  45.09 
 
 
217 aa  129  4.0000000000000003e-29  Pseudomonas putida W619  Bacteria  normal  0.473063  normal  0.447957 
 
 
-
 
NC_013745  Htur_4755  binding-protein-dependent transport systems inner membrane component  41.57 
 
 
224 aa  128  8.000000000000001e-29  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_002976  SERP2030  amino acid ABC transporter, permease protein  35.96 
 
 
211 aa  128  9.000000000000001e-29  Staphylococcus epidermidis RP62A  Bacteria  normal  0.207242  n/a   
 
 
-
 
NC_010718  Nther_0120  binding-protein-dependent transport systems inner membrane component  41.18 
 
 
281 aa  127  1.0000000000000001e-28  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1598  substrate-binding region of ABC-type glycine betaine transport system  45.86 
 
 
516 aa  127  2.0000000000000002e-28  Cupriavidus metallidurans CH34  Bacteria  normal  0.144217  normal 
 
 
-
 
NC_009632  SaurJH1_2522  binding-protein-dependent transport systems inner membrane component  35.58 
 
 
211 aa  126  3e-28  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.241712  n/a   
 
 
-
 
NC_008688  Pden_4885  binding-protein-dependent transport systems inner membrane component  41.41 
 
 
216 aa  126  3e-28  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.694048 
 
 
-
 
NC_009487  SaurJH9_2474  binding-protein-dependent transport systems inner membrane component  35.58 
 
 
211 aa  126  3e-28  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.13842  n/a   
 
 
-
 
NC_007484  Noc_0540  ABC transporter inner membrane/substrate-binding proteins  40.57 
 
 
501 aa  126  4.0000000000000003e-28  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0119  substrate-binding region of ABC-type glycine betaine transport system  41.57 
 
 
523 aa  126  4.0000000000000003e-28  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000124345  n/a   
 
 
-
 
NC_013132  Cpin_4963  binding-protein-dependent transport systems inner membrane component  43.68 
 
 
522 aa  125  6e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0875398  normal  0.252786 
 
 
-
 
NC_009436  Ent638_1922  binding-protein-dependent transport systems inner membrane component  43.09 
 
 
215 aa  125  7e-28  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2379  Substrate-binding region of ABC-type glycine betaine transport system  42.64 
 
 
518 aa  125  7e-28  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1202  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
212 aa  124  1e-27  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0296  binding-protein-dependent transport systems inner membrane component  39 
 
 
248 aa  124  1e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1686  binding-protein dependent transport system inner membrane protein  44.07 
 
 
207 aa  124  2e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.038351  normal  0.407571 
 
 
-
 
NC_010682  Rpic_2784  Substrate-binding region of ABC-type glycine betaine transport system  42.13 
 
 
504 aa  123  2e-27  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5062  binding-protein-dependent transport systems inner membrane component  37.88 
 
 
255 aa  123  3e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.646466  normal 
 
 
-
 
NC_009656  PSPA7_1216  ABC transporter permease  40.66 
 
 
220 aa  123  3e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2914  binding-protein-dependent transport systems inner membrane component  38.37 
 
 
220 aa  123  3e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.208767 
 
 
-
 
NC_008527  LACR_0914  choline ABC transporter permease and substrate binding protein  38.12 
 
 
500 aa  123  3e-27  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.222381  n/a   
 
 
-
 
NC_002976  SERP2357  amino acid ABC transporter, permease protein  34.48 
 
 
211 aa  122  4e-27  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2516  putative lipoprotein transmembrane  42.79 
 
 
520 aa  122  4e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.2714  hitchhiker  0.00948908 
 
 
-
 
NC_008391  Bamb_4538  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
255 aa  122  4e-27  Burkholderia ambifaria AMMD  Bacteria  normal  0.52595  normal 
 
 
-
 
NC_010465  YPK_2862  binding-protein-dependent transport systems inner membrane component  37.7 
 
 
278 aa  122  5e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.01956  n/a   
 
 
-
 
NC_009620  Smed_4640  binding-protein-dependent transport systems inner membrane component  38.07 
 
 
246 aa  122  5e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.0951209  normal  0.118631 
 
 
-
 
NC_009708  YpsIP31758_2783  quaternary amine ABC transporter permease  37.7 
 
 
278 aa  122  6e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3333  Substrate-binding region of ABC-type glycine betaine transport system  38.33 
 
 
524 aa  122  6e-27  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000937167  n/a   
 
 
-
 
NC_009436  Ent638_2727  binding-protein-dependent transport systems inner membrane component  38.43 
 
 
245 aa  121  9e-27  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2946  binding-protein-dependent transport systems inner membrane component  40.78 
 
 
255 aa  121  9e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0159646  n/a   
 
 
-
 
NC_011772  BCG9842_B3062  glycine betaine/L-proline ABC transporter, permease and substrate-binding protein  44.63 
 
 
503 aa  120  1.9999999999999998e-26  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1515  Substrate-binding region of ABC-type glycine betaine transport system  38.55 
 
 
526 aa  120  1.9999999999999998e-26  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0692577  n/a   
 
 
-
 
NC_013440  Hoch_5205  Substrate-binding region of ABC-type glycine betaine transport system  43.92 
 
 
537 aa  120  1.9999999999999998e-26  Haliangium ochraceum DSM 14365  Bacteria  normal  0.057164  normal 
 
 
-
 
NC_008530  LGAS_0705  ABC-type proline/glycine betaine transport system, permease and substrate binding protein  42.22 
 
 
516 aa  120  1.9999999999999998e-26  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.000153769  normal 
 
 
-
 
NC_011773  BCAH820_2306  glycine betaine/L-proline ABC transporter, permease and substrate-binding protein  44.63 
 
 
503 aa  119  3e-26  Bacillus cereus AH820  Bacteria  n/a    normal  0.816481 
 
 
-
 
NC_005945  BAS2126  glycine betaine/L-proline ABC transporter permease  44.63 
 
 
503 aa  119  3e-26  Bacillus anthracis str. Sterne  Bacteria  normal  0.887969  n/a   
 
 
-
 
NC_005957  BT9727_2064  glycine betaine/choline ABC transporter, ATP-binding protein  44.63 
 
 
503 aa  120  3e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.508054  n/a   
 
 
-
 
NC_006274  BCZK2060  glycine betaine/choline ABC transporter, ATP-binding protein  44.63 
 
 
503 aa  120  3e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1680  binding-protein-dependent transport systems inner membrane component  42.39 
 
 
215 aa  120  3e-26  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0615748  n/a   
 
 
-
 
NC_007908  Rfer_1857  binding-protein-dependent transport systems inner membrane component  44.13 
 
 
256 aa  119  3e-26  Rhodoferax ferrireducens T118  Bacteria  normal  0.930718  n/a   
 
 
-
 
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