Gene Bpro_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1155 
Symbol 
ID4011989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1196501 
End bp1197142 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID637940832 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_548004 
Protein GI91787052 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCG ACACCTGGAA CTTCCTGGCG ACCCATCCGA CCCAGTTCTA TCGGGCCCTG 
GGCGTGCACA TTGCCCTGTC AGGGTCAGCG CTGTTTTTGG CCGCGCTGAT CAGCATACCT
GCCGGTATTG CCGTGGCGCG GCGTGGCGGC CTGGCGCTGG CCGTGGTCAA CGCGGCGAAT
GTCGGACGCA CCTTGCCGTC GCTGGCCGTG CTCGCGCTGG TCATGCCGCT TCTGGGGACC
GGCTTTGCGC CTGCGCTGTT CGCCCTGACG CTGATCGCGC TGCCGCCCAT CGTGACCCAC
ACCATCGTCG GCATGCGTGG CGTGGACGCC GATGCCGTCG ACGCGGCGGT TGGCATGGGC
ATGACGCGGA CCCTGCTGTT GCGGCAGGTC GAACTGCCGA TGGCCCTGCC GGTCATCTTT
GCGGGCCTGC GCACTGGCGC GGTGCAGGTG ATTTCCGGGG CGGTGCTGGC GGCCTTTATT
GGCGGCGGCG GGCTTGGCGA CTTCATCACC GCGGGCATTG CCATGATGGC CATCCCCCAA
CTGCTGGTGG GCGCCATCCC GGTGACCCTG CTGGCGCTGG GCACTGATTT TCTTTTTGGC
GCCTTGCAGC GCCGCATGAC CCCTCAGGGC CTTCGCGCAT GA
 
Protein sequence
MLADTWNFLA THPTQFYRAL GVHIALSGSA LFLAALISIP AGIAVARRGG LALAVVNAAN 
VGRTLPSLAV LALVMPLLGT GFAPALFALT LIALPPIVTH TIVGMRGVDA DAVDAAVGMG
MTRTLLLRQV ELPMALPVIF AGLRTGAVQV ISGAVLAAFI GGGGLGDFIT AGIAMMAIPQ
LLVGAIPVTL LALGTDFLFG ALQRRMTPQG LRA