Gene PSPA7_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_1216 
Symbol 
ID5356831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand- 
Start bp1226318 
End bp1226980 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID640810269 
ProductABC transporter permease 
Protein accessionYP_001346601 
Protein GI152989122 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCT TCAGCGTGCT TTCCCATCTC GACTGGACCC AGGTCGGCCA GCTCACCCTC 
CAGCACCTGC TGCTGGTGCT GGTCGCCGTG GGCCTGGCGA TCCTCGTCGG CGTGCCGCTG 
GGTGTGCTGA TGACCCGTTT CAAGTGGCTG GCCGGCCCGC TGCAGGGCGC CGCCACGGTG 
ATGCTGACGA TCCCCTCGAT CGCCCTGTTC GGCCTGCTGA TGCCGATCTA CTCGGTGTTC 
GGCCAGGGCC TCGGGCCGCT GCCGGCGATC ACCGCGGTGT TCCTCTATTC GCTGCTGCCG 
ATCCTGCGCA ACACCTACCT CGCCCTGACC GGCGTGGAGC CGGGCATCCG CGAAGCCGGC 
AAGGGCATCG GCATGACCTT CTGGCAGCGC CTGCGGATGG TCGACATTCC CCTCGCGGTG 
CCGGTGATCC TCGCCGGCGT GCGCACCGCC GTGGTGATGA ACATCGGCGT GATGACCATC 
GCCGCGGTGA TCGGCGCCGG CGGCCTGGGC GTGCTGATCC TCACTTCCAT CAGCCAGAGC 
AACATGCCGA TGCTGGTCGT CGGCGCGGTG CTGGTCAGCC TCCTGGCCAT CGTCGCCGAC 
CTGCTGCTGC AATGGCTGCA ACGCATCCTC ACCCCCAAGG GACTGCGCGC CGGCGCGCAC 
TGA
 
Protein sequence
MDFFSVLSHL DWTQVGQLTL QHLLLVLVAV GLAILVGVPL GVLMTRFKWL AGPLQGAATV 
MLTIPSIALF GLLMPIYSVF GQGLGPLPAI TAVFLYSLLP ILRNTYLALT GVEPGIREAG 
KGIGMTFWQR LRMVDIPLAV PVILAGVRTA VVMNIGVMTI AAVIGAGGLG VLILTSISQS 
NMPMLVVGAV LVSLLAIVAD LLLQWLQRIL TPKGLRAGAH