Gene Bcen_5737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5737 
Symbol 
ID4096347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand+ 
Start bp277498 
End bp278151 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID638019013 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_625579 
Protein GI107028484 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTAT TCGACTATCT CGCTTCGAGC TGGCCCGAGC TGCTGCAACT CACGCTGCAG 
CACGTGTGGC TCGTCGCGAT CGCCGTGGGC TGCGCGATCG TCGCCGGCGT ACCGCTCGGT 
ATCCTGATCA ATCGCCACGA CTGGCTCGCC GGGCCGCTGC TCGGCATTGC CACGCTCGTG 
CTCACGCTGC CGTCCATCGC GCTGTTCGGC CTGATGATCC CGTTGTTCTC GCGCTTCGGC 
CAGGGTATCG GCGCCGCGCC CGCGATCACC GCCGTGTTCC TCTACTCGCT GCTGCCGATC 
ATGCGCAACA CCTACCTCGC GTTGCACAAC GTGGAGGCGG GAGTCAAGGA AGCCGGCACC 
GGCATCGGCA TGACGTCGTG GCAGCGCCTG CGCCTCGTCG AGCTGCCGCT CGCGGTGCCC 
GTGATTCTCG CGGGCGTGCG CACCGCGGTC GTGATGAACA TCGGCGTGAT GACGATCGCC 
GCCGTGATCG GCGCGGGCGG CCTCGGCACG CTGATCCTGC GTGCGATCGG CCAGAGCAGC 
ATGATGAAAC TGCTGGTGGG CGCGGTGCTC GTGAGCCTGC TCGCGATCGT CGCCGACCGG 
CTGCTGCAGA TGCTGCAACG TGCATTGACA CCGAAGGGAG TGCAGAAGAC ATGA
 
Protein sequence
MSVFDYLASS WPELLQLTLQ HVWLVAIAVG CAIVAGVPLG ILINRHDWLA GPLLGIATLV 
LTLPSIALFG LMIPLFSRFG QGIGAAPAIT AVFLYSLLPI MRNTYLALHN VEAGVKEAGT 
GIGMTSWQRL RLVELPLAVP VILAGVRTAV VMNIGVMTIA AVIGAGGLGT LILRAIGQSS 
MMKLLVGAVL VSLLAIVADR LLQMLQRALT PKGVQKT