Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_0746 |
Symbol | |
ID | 5167808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | + |
Start bp | 815369 |
End bp | 816883 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640565096 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_001246125 |
Protein GI | 148267182 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAACT TTTTCGACAT ATTGAGTGAA CGTAAGGGGC AACTCTTTTC GACAATGATA GAACATATTC AAATATCATT TATTGCATTA TTGATTGCAA CTGCTATTGC GGTACCATTA GGTATTTTAT TAACGAAGAC TAAAACGATA TCTGAAATCG TAATGAATAT TGCGGCAATT CTTCAAACCA TACCATCGTT GGCATTATTA GGTTTAATGA TTCCTTTATT TGGTATCGGT CGTGTGCCAG CAATTATTGC ACTTGTAGTG TATGCGTTGT TACCAATTTT AAGGAATACG TATACTGGAA TTAAAGAAGT TGATCCATCA CTCATTGAAG CGGCTAAAGG TATAGGTATG AAACCATTTA GACGTTTAAC TAAAGTCGAA CTTCCGATAG CAATGCCTGT TATAATGGCT GGTGTAAGAA CGGCTATGGT ATTAATTATA GGTACAGCGA CACTAGCAGC ATTAATTGGT GCAGGCGGAC TAGGAGATTT AATTTTATTA GGTATAGACC GTAACAATGC GTCATTGATA TTATTAGGTG CAATTCCAGC AGCCTTATTG GCAATTATAT TTGATTTAAT TTTAAGATTT ATGGCTAAAT TATCTTATAA AAAGTTATTG ATGACGTTAG GTGTTATAGT GATGATTATT ATACTGGCCA TCGCTATTCC TATGTTTGCA CAAAAAGGTG ATAAAATTAC GTTAGCTGGA AAGCTTGGCT CCGAGCCTTC GATTATTACA AATATGTATA AAATTTTAAT AGAAGAAGAG ACCAAAAATA CTGTAGAAGT GAAAGATGGT ATGGGGAAAA CAGCATTTTT ATTTAATGCT TTAAAATCTG ATGATATAGA TGGGTATTTA GAGTTTACTG GAACAGTTTT AGGTGAATTA ACAAAAGAAC CATTGAAGTC AAAAGAAGAG AAAAAAGTTT ATGAACAAGC TAAGCAAAGT CTTGAAAAGA AATATCAAAT GACTATGTTA AAACCAATGA AGTATAACAA TACGTATGCT TTAGCTGTAA AACGTGATTT TGCTAAACAA CATAATATAC GTACAATTGG TGATTTAAAT AAGGTTAAAG ATCAACTTAA ACCAGGATTT ACATTGGAAT TTAATGATCG TCCAGATGGT TACAAAGCTG TTCAAAAGGC TTATAATTTA AATTTAGATA ACATACGTAC AATGGAACCT AAGTTGAGAT ATCAAGCGAT CAATAAAGGT AATATTAATT TAATAGATGC ATATTCAACT GACGCTGAAT TAAAACAATA TGATATGGTT GTGTTAAAAG ATGATAAGCA CGTATTTCCA CCATATCAAG GAGCACCATT ATTTAAAGAA AGCTTTTTAA AGAAACATCC AGAAATTAAG AAACCGTTAA ACAAACTAGA AAACAAAATA TCTGATGAAG ATATGCAAAT GATGAACTAT AAAGTAACAG TTAAAAATGA AGACCCATAT ACAGTTGCGA AAGATTATTT AAAAGCAAAA GGGTTAATCA AATAA
|
Protein sequence | MTNFFDILSE RKGQLFSTMI EHIQISFIAL LIATAIAVPL GILLTKTKTI SEIVMNIAAI LQTIPSLALL GLMIPLFGIG RVPAIIALVV YALLPILRNT YTGIKEVDPS LIEAAKGIGM KPFRRLTKVE LPIAMPVIMA GVRTAMVLII GTATLAALIG AGGLGDLILL GIDRNNASLI LLGAIPAALL AIIFDLILRF MAKLSYKKLL MTLGVIVMII ILAIAIPMFA QKGDKITLAG KLGSEPSIIT NMYKILIEEE TKNTVEVKDG MGKTAFLFNA LKSDDIDGYL EFTGTVLGEL TKEPLKSKEE KKVYEQAKQS LEKKYQMTML KPMKYNNTYA LAVKRDFAKQ HNIRTIGDLN KVKDQLKPGF TLEFNDRPDG YKAVQKAYNL NLDNIRTMEP KLRYQAINKG NINLIDAYST DAELKQYDMV VLKDDKHVFP PYQGAPLFKE SFLKKHPEIK KPLNKLENKI SDEDMQMMNY KVTVKNEDPY TVAKDYLKAK GLIK
|
| |