Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0120 |
Symbol | |
ID | 6317172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 143328 |
End bp | 144173 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642642498 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001916307 |
Protein GI | 188584762 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTCA ATAAAAACAC AAAATCTGAA CTTAACCACC GTCAAGTCGA AATCCAAGAT AAAGGTGAAA GTAGGACTCG ATCTCGACAG ATTAAAGTAA TATTAACAAA GTACTCTCAT ATACTTATTC CGATCTTGTA TATAACTTTG GGAACTGTTT ATACGGTTAT TAATGTTCAA AATCCTGTTG ATAGTTTAGC AGAAGGGTGG TTGTCATATG AAAGAATTGG TGGATTACTT TATGAACATA TAATTCTAGT TGGACTTGCT ACTTTAGGAG CTATCTTAAC AAGTGTTCCT TTAGGTATTT TAATTACCCG GCCCACCTTT AGATGGCTCA CTCCTTTTGT AGATAACCCT GTCAATGTGG GTCAAACTGT TCCTAGCATA GCTATCTTAG GTTTAGCATA TTACTTTATG GGGACAGGAT TACTTACAGC TTTATTTGCA TTATGGTTAT ATTCGCTTCT GCCTATACTT CGGAACACTT CTATTGGAAT TAAAAGTGTA GATCCGGAAA TCTTGGAAGC CGCTAGGGGA ATGGGTATGA CACCTTATAG GATTTTTATA AAAATAGAAT TTCCCTTAGC GCTACCTGTT ATTATGGCAG GGATAAGGAC TTCAGTAGTC ATTTGTACGG GAGCAGCTAC CCTGGCCACC TTTATTGGAG CCGGGGCTCT TGGAGAAATC ATTAATGCTG GGTTATCCAT GAGGCGTATT CAACTTGTTT ATCAAGGGGC AGTATTAGCA GCACTATTTG CTTTGTTGCT TGATAATTTG ATAGGGACCT TAGAAAGATA TTTAACTCAA GAAGCTTATG ATGAGGACGA GGTCGACGAA AATTAG
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Protein sequence | MTVNKNTKSE LNHRQVEIQD KGESRTRSRQ IKVILTKYSH ILIPILYITL GTVYTVINVQ NPVDSLAEGW LSYERIGGLL YEHIILVGLA TLGAILTSVP LGILITRPTF RWLTPFVDNP VNVGQTVPSI AILGLAYYFM GTGLLTALFA LWLYSLLPIL RNTSIGIKSV DPEILEAARG MGMTPYRIFI KIEFPLALPV IMAGIRTSVV ICTGAATLAT FIGAGALGEI INAGLSMRRI QLVYQGAVLA ALFALLLDNL IGTLERYLTQ EAYDEDEVDE N
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