Gene Nther_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0120 
Symbol 
ID6317172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp143328 
End bp144173 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content38% 
IMG OID642642498 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001916307 
Protein GI188584762 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCA ATAAAAACAC AAAATCTGAA CTTAACCACC GTCAAGTCGA AATCCAAGAT 
AAAGGTGAAA GTAGGACTCG ATCTCGACAG ATTAAAGTAA TATTAACAAA GTACTCTCAT
ATACTTATTC CGATCTTGTA TATAACTTTG GGAACTGTTT ATACGGTTAT TAATGTTCAA
AATCCTGTTG ATAGTTTAGC AGAAGGGTGG TTGTCATATG AAAGAATTGG TGGATTACTT
TATGAACATA TAATTCTAGT TGGACTTGCT ACTTTAGGAG CTATCTTAAC AAGTGTTCCT
TTAGGTATTT TAATTACCCG GCCCACCTTT AGATGGCTCA CTCCTTTTGT AGATAACCCT
GTCAATGTGG GTCAAACTGT TCCTAGCATA GCTATCTTAG GTTTAGCATA TTACTTTATG
GGGACAGGAT TACTTACAGC TTTATTTGCA TTATGGTTAT ATTCGCTTCT GCCTATACTT
CGGAACACTT CTATTGGAAT TAAAAGTGTA GATCCGGAAA TCTTGGAAGC CGCTAGGGGA
ATGGGTATGA CACCTTATAG GATTTTTATA AAAATAGAAT TTCCCTTAGC GCTACCTGTT
ATTATGGCAG GGATAAGGAC TTCAGTAGTC ATTTGTACGG GAGCAGCTAC CCTGGCCACC
TTTATTGGAG CCGGGGCTCT TGGAGAAATC ATTAATGCTG GGTTATCCAT GAGGCGTATT
CAACTTGTTT ATCAAGGGGC AGTATTAGCA GCACTATTTG CTTTGTTGCT TGATAATTTG
ATAGGGACCT TAGAAAGATA TTTAACTCAA GAAGCTTATG ATGAGGACGA GGTCGACGAA
AATTAG
 
Protein sequence
MTVNKNTKSE LNHRQVEIQD KGESRTRSRQ IKVILTKYSH ILIPILYITL GTVYTVINVQ 
NPVDSLAEGW LSYERIGGLL YEHIILVGLA TLGAILTSVP LGILITRPTF RWLTPFVDNP
VNVGQTVPSI AILGLAYYFM GTGLLTALFA LWLYSLLPIL RNTSIGIKSV DPEILEAARG
MGMTPYRIFI KIEFPLALPV IMAGIRTSVV ICTGAATLAT FIGAGALGEI INAGLSMRRI
QLVYQGAVLA ALFALLLDNL IGTLERYLTQ EAYDEDEVDE N