Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4757 |
Symbol | |
ID | 8745347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013745 |
Strand | - |
Start bp | 370632 |
End bp | 371318 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646515255 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003406202 |
Protein GI | 284172820 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAGT CATACATTGA GTTCACACTC AATAACTGGA AGGACCTCTT CCAGCTTCTT ATCGAACACG TTGAGCTCGT CGTCCAGACG CTGGTAATCG CGCTCCCGCT CGGAATCTTC CTCGGGATAT TCATCGCGTA TTACCAGCCT GCAGCGCTCG GCGTTCTGTG GGGCGCTGGC ATCGCGATGA CGATCCCCAG TCTCGCACTG TTCGGGCTGC TCATCCCGTT CCTCGGGATA GGTAATCCGC CAGTCATCGT TGCCCTGGTA CTGTACGCAC AACTGCCAAT CATCAGGAAT ACGTACATCG GACTAACCGG TGTCAATGAA AACATGATCG AAGCCGGCGA AGGGGTCGGA ATGACCCGGT GGCAGCGACT CCGCCAAATA CAGATCCCGG TCGCACTGCC GGTGATTACC GCGGGTGTGC GGAACGCGAC CGTGATCCTG ATCGGTGTGG CAACAGTGGG AGCGTACGTC GGTGCCGGTG GGCTCGGTGA CTACATCTTC ACGGGGATCT ACCAGGCGAA TACCGAAATG GTCGTCGTCG CAACGATCAT CGTCTCGCTG TTGGCGCTGG TCTTCGATTA CGGCCTCAAA ACGGTTGAAC AGCTCTTGCA ACTTCGAAAC GGAGAAGATA TCTCCCTCAC GAGGGGGACG AAAGCAATTA CAACGGTGGT ACCATGA
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Protein sequence | MIESYIEFTL NNWKDLFQLL IEHVELVVQT LVIALPLGIF LGIFIAYYQP AALGVLWGAG IAMTIPSLAL FGLLIPFLGI GNPPVIVALV LYAQLPIIRN TYIGLTGVNE NMIEAGEGVG MTRWQRLRQI QIPVALPVIT AGVRNATVIL IGVATVGAYV GAGGLGDYIF TGIYQANTEM VVVATIIVSL LALVFDYGLK TVEQLLQLRN GEDISLTRGT KAITTVVP
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