| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3032 |
|---|
| Symbol | |
|---|
| ID | 8598486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 3171746 |
|---|
| End bp | 3173341 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | Substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_003309805 |
|---|
| Protein GI | 269121628 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.367999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGAAC TTAAGGAATA TATGGCAAGT ATTTTTAAGG AAATCACAGA AAACGGACCC
TATTATATAA ATTTACTTAT ACAGCATCTG AAAATATCAG TATTTTCAAT AGTTATTGCA
GTAATTTTAG GAATCACAAT AGGAATATAT ATTTTTTATA ATAAAAAAAT TCGCAGTCTG
ATACTGGGAA TTACAAACGG AATTTATACA ATACCGTCAA TTGCAGTGCT GGGACTGCTT
ATACCACTTG TGGGGATAGG CTTTTGGAAT GCATCTGTCA CACTTATAAT ATACGGACTG
CTTCCGGTAA TAAGAAATAC TTATACAGGA CTGGAAAGTA CAGATAAAAA AATAATAGAA
ATTTCAGAAG GAATGGGAGC TACTGAATTC CAGACTTTTA AAAATATCCG CCTTCCTCTT
GCAATGCCTA TTATTATCTC AGGTATCAGA ACAGTAGTTA TTATGACAAT ATCACTTGCA
GGTATAGCAT CATTTATCGG TGCCGGCGGC TTGGGACAGG CAATATACCG CGGGATCAAT
ACTAATAATT CAGTTTTGAT AGTAATTGGA AGTTTGCTTA TAGCAATACT GGCAATTGTT
CTGGATTATT TTTTGAATGT AGTAGAGAAA AAAGCATTTA GAAAAGTAAA CGGATATCGT
GAACTAAAAG CAGGACAGAC AAAAAGAACT GCATTGATAC TGGGAACAGC AGCAGCGGCA
ATATTAGTTT TTACAATATT TTCAAAAGTT TACGGACCGA AACCGGGAGG AGCAGACGGA
AAAATAATAA CTATAGCAAC GAAGCCAAGT GCAGAACAGC TTATACTCGG TGAGATGGCA
AGCCTGCTTA TAGAGAAAAA CACTAAAATA CATGTAGAGA AGAAATTCAG TATAGGCGGC
GGAACATCAA ATATTCATCC TGCAATGGTA AAGGGAGAAG TGGATATGTA TCCTGAATAT
ACGGGAACTT CCTGGCTGTT CGTGCTAAAG CATGAAAAGG CCCTTCCAAA GGATGAAATG
TATGCACAGC TGAAAAAGGA ATATGAAGAT AAGTTCAATT TTGAGTGGCT TGGTCTTCTG
GGCTTTAATA ATACTTTTAC ACTTTCTATG AAAAGAGAGG AAGCAGAGAA AAATAACATA
AAAACTTTTT CAGATCTGGC AAAGGCAAGT AATCAATACA GATTTGGGGC GGAGTTTGAT
TTTTTCGAGA GAGAGGATGG ATATCCGGGA CTGAAAAAGG TGTACGGTTT TGATTTCAAA
AAGCTGGTTG AACTGGATAT AAATCTAAAA TATAAGGCTA TGGAGGGAAA AGAGGTAGAT
GTGATAAATT CATTTTCTAC AGACAGTCTG ATAAAAAAAT ATGATCTTGT AACATTACAG
GATGATAAAG ATTATTTTCC TTCATATAAT GCAGGATTCG TAATAAAAAA GGAAACGCTG
AAAAAATATC CCGAAATAAA ACCTTTGATA GAAAAGCTAA ACGGAATGTT AGATGATGAA
ACTATGACAA ATCTGAATTA TCAGGTAGAA GTAGAGAATA AAAATCCTCA GGATGTGGCA
AGAAAATTTC TTGAAGAAAA GGGGCTGATA AAATGA
|
|---|
| Protein sequence | MGELKEYMAS IFKEITENGP YYINLLIQHL KISVFSIVIA VILGITIGIY IFYNKKIRSL
ILGITNGIYT IPSIAVLGLL IPLVGIGFWN ASVTLIIYGL LPVIRNTYTG LESTDKKIIE
ISEGMGATEF QTFKNIRLPL AMPIIISGIR TVVIMTISLA GIASFIGAGG LGQAIYRGIN
TNNSVLIVIG SLLIAILAIV LDYFLNVVEK KAFRKVNGYR ELKAGQTKRT ALILGTAAAA
ILVFTIFSKV YGPKPGGADG KIITIATKPS AEQLILGEMA SLLIEKNTKI HVEKKFSIGG
GTSNIHPAMV KGEVDMYPEY TGTSWLFVLK HEKALPKDEM YAQLKKEYED KFNFEWLGLL
GFNNTFTLSM KREEAEKNNI KTFSDLAKAS NQYRFGAEFD FFEREDGYPG LKKVYGFDFK
KLVELDINLK YKAMEGKEVD VINSFSTDSL IKKYDLVTLQ DDKDYFPSYN AGFVIKKETL
KKYPEIKPLI EKLNGMLDDE TMTNLNYQVE VENKNPQDVA RKFLEEKGLI K
|
|---|
| |