| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_1127 |
|---|
| Symbol | |
|---|
| ID | 5757610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 1207198 |
|---|
| End bp | 1207848 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641302334 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001568169 |
|---|
| Protein GI | 160902588 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.721959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTT TTACATACGT TGCTGAAAAT CTTGGTTATA TGGGAATAAA GACTATGGAA
CATCTTTATT TGTTTGCATC TTCTTGGGCA ATTGCCATAG TTGTGGGAAT GGCGATAGGA
ATCTATGTTA CCCGCCCCGG GAAAGAGAAG AGTGGAAGAA TAGCACTTTC AATCACAGGA
ATAGCCCAGG CGGTCCCAAG TATTGCCGTC ATAGCTCTGG TTTTTTTATT CATGGGAATA
GGCCCAGCCC CGGCGATCTT TGCCCTGTTT TTATACAGCA TAGTTCCTAT AACTTTTAAC
ACGGCATCTG GACTTTTCGG CATTGATAAA GGTATGAAAG AAGCAGCAAG AGGAATGGGA
ATGACTAAAA GGGAAATCCT GTGGAAAGTA GAAATCCCAA ACGCGATACC TACTATTTTT
TCAGGAATAA GAAATGCAGC CATAATAAAT TTAGGAACAG CTACAATCGC GTCAGCCATA
GGTGCTGGAG GATTGGGAGA ATTAATTTTT ATAGGTCTTG GGACCTTTAA ATTCGAGATG
ATATTAGCTG GAGCTATTCC AGTTTCAATA ATGGCCGTTT TAATTGATTT CATACTCGCT
TTAATACAAA ACAAAATGAC TTCGGAAGGT ATTAAATTAC AAAATGAATA A
|
|---|
| Protein sequence | MEFFTYVAEN LGYMGIKTME HLYLFASSWA IAIVVGMAIG IYVTRPGKEK SGRIALSITG
IAQAVPSIAV IALVFLFMGI GPAPAIFALF LYSIVPITFN TASGLFGIDK GMKEAARGMG
MTKREILWKV EIPNAIPTIF SGIRNAAIIN LGTATIASAI GAGGLGELIF IGLGTFKFEM
ILAGAIPVSI MAVLIDFILA LIQNKMTSEG IKLQNE
|
|---|
| |