| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0317 |
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| Symbol | |
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| ID | 8724045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 406121 |
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| End bp | 407680 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003385180 |
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| Protein GI | 284035250 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.417886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGT TTTTCGCTTT TGTCCGTGAT CATGCTGATA AGTTACTGGA ACAAACGCTG
ACCCATATCG GGCTAACGTT TGTATCGTTG CTGCTGGCCT TGCTGATTGG GGTGCCGCTT
GGCATTTTTA TCGCCCGAAA AACCCGCCTT GCAAACGGTG TACTGGGTGT GGCGGGTGTA
TTGCAGACAG TGCCGAGCGT TGCCTTGCTG GGTTTCCTGA TTCCTTTGCT GGGGATTGGC
GTTGGCCCGG CGCTGGTTGC GTTATTTTTA TACGCCTTGC TGCCGATCAT TCGAAATACG
TTTGTGGGCA TCACCGAAGT AAGCCCGTTG ATAAAGGAAG CGGCCCGTGG CGTAGGCATG
ACCGAAAATC AAATCCTGAC AAAAGTTGAG TTGCCGCTGG CGTTACCGGT CATCTTTGCG
GGTGTCCGCA CGGCAACCGT TATTAACGTA GGCGTGGCAA CACTGGCGGC TTATGTAGCG
GCTGGTGGAC TGGGAGAGTT TATTTTTAGC GGGATTGCGC TCAGTAATGT CAATATGATG
CTGTCCGGCG CTATTCCGGC TGCGTTACTG GCTATCGGCT TCGATTTCGG ACTAGCCCGT
TTGCAGCATT TATCGGGAAA AAAGCTGCGG GTTGGCGCAC TGGCCTTTGT CGTGCTGGTG
CCGTTTTTGT CGGCGTTTTA CCTGGTGCCG GGGCGTCAGG ATAAATTGAT TGCAGGTTTT
GCGCACGAGT TCTACGGCCG TGCCGATGGC TATCCGGGTT TGCAGAAAAC GTACGGGCTG
CAACTGCGCC CCCGGCTCAT CGACCAGAAC CTAATGTACG AAGCCATTCA TCGGGAGCAG
GTCGATATCA TCAGCGGCTA CTCGACCGAT GGCCGAATCA ATGCTTTCAA TCTGCTAGTC
CTGGCCGATC CTAAACACGC CTTTCCGCCC TATGATGCGG CCCCGGTTGT TCGACAAGCC
GCACTTGACC GGCACCCTGA GCTAGAACCG ACGTTGAATC GACTAGTGGG TAAACTGACG
GATTCGGTGA TGACGGCCCT GAACTACCGC GTCGATTATA AGAAAGAATC GCCGGAACGT
GTGGCGCGGG AGTTTCTGCA ACAAATGGGT TTATACAAAC CGCCCGCGCC GGAGGCTCGT
ACCGAAACCG TTGTGATGGG TTCTAAAGTA TTTACGGAGC AGTACATTCT GGCGGAGATT
TACCGGCAGT TGATCGAAGG TCAGACGCAA CTTCGGATGG TAACAAAAAC GGGCCTGGGC
GGTACACAGA TCTGCTTCGA CGCCCTCCGC ACCGGGGCCA TTGATTTCTA TCCCGAATAC
ACCGGAACGG GTTTATTAGT GGTTTTACAG CCGTCGTCGG CTGTCTTGAA AACATTGCCA
ATGCAGTCCG ATTCAGTCTA TAAGTTTTGC CGCGAGCAGT TTCGGCAGAA GTATCAGCTT
ACCTGGCTGA AGCCGCTTGG ATTTAATAAC AGCTATTGCC TGATGATGCG CCGGGAGCAG
GCTCAAAAAG CAGGCATCCA ATCTATTAGT GATCTGGTGA CGTACCTTGG CAAAAACTGA
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| Protein sequence | MTEFFAFVRD HADKLLEQTL THIGLTFVSL LLALLIGVPL GIFIARKTRL ANGVLGVAGV
LQTVPSVALL GFLIPLLGIG VGPALVALFL YALLPIIRNT FVGITEVSPL IKEAARGVGM
TENQILTKVE LPLALPVIFA GVRTATVINV GVATLAAYVA AGGLGEFIFS GIALSNVNMM
LSGAIPAALL AIGFDFGLAR LQHLSGKKLR VGALAFVVLV PFLSAFYLVP GRQDKLIAGF
AHEFYGRADG YPGLQKTYGL QLRPRLIDQN LMYEAIHREQ VDIISGYSTD GRINAFNLLV
LADPKHAFPP YDAAPVVRQA ALDRHPELEP TLNRLVGKLT DSVMTALNYR VDYKKESPER
VAREFLQQMG LYKPPAPEAR TETVVMGSKV FTEQYILAEI YRQLIEGQTQ LRMVTKTGLG
GTQICFDALR TGAIDFYPEY TGTGLLVVLQ PSSAVLKTLP MQSDSVYKFC REQFRQKYQL
TWLKPLGFNN SYCLMMRREQ AQKAGIQSIS DLVTYLGKN
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