| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2864 |
|---|
| Symbol | |
|---|
| ID | 6087356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3160160 |
|---|
| End bp | 3161314 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641597935 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001721593 |
|---|
| Protein GI | 170025088 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTAA AAAACCGGGT TTTGCTAACA CTGTCTATTT TATTGGTTTT AGCAGGCGCG
GGGCTTGCCT TTCTTAGTCA TGCTCCTAAT CGATTGATTT CCGGACAGGG GATCATGCTG
ATATCGCTAA TAACCGGTCC TGTCCTGTGG CTGTTAGCAC CGATACTGGG GTTAATTATC
TTTGCTTTTC TCACTCCCAG CATCGCCCTC TATTGGTTGA TTATCTTGTT TGCAGAGCTG
CTGTTATTGG GTTTACTGCT ATTGGCGGGT GCCACCGCAA CTCAATTGGC CGGAGGCGAA
GAGAGCCTCG TCCGCACGTC ATTAGGTGGC GGGTTTTGGT TGATGAGTGG GGTGAGTCTC
TTGATTGCTA TCGACAGCTT ATCCCGCGTC ATTGCTCATC CAGTCTGGCG CAGTTTAGCC
ATTGCTTTGT TGATGCTACC AATCATTGCA TTGCTGGCAA GTGGGCAATT AGATCAACTG
TCATTAATGA AGGAATATGT GAATCGTCGG GACGTATTTG ATGATGCCCT ATGGCGGCAC
ATCCAAATAC TACTGACTAC GTTAGTTCCG GCAGTGGTTA TCGGCATTCC TCTTGGTTTA
CTTTGTTTTC ACTCTCACCG TTTACAAGGC GCTATTTTTT CGACGCTAAA CATTATTCAA
ACGATCCCAT CGATTGCTCT ATTTGGTTTG CTGATTGCAC CATTGTCAGG GTTGGCCGCA
GCTATCCCTT GGCTTGCTGA ACTGGGTATC GGTGGCATTG GCTTAGCGCC TGCAATTATC
GCACTGGTGC TGTACGCCTT ATTACCCTTA GTGCGTAATG TGGTTGCCGG ATTAGAGGCT
GTCCCCGACA GTGTGGTGGA GTCAGCCAAA GGTATGGGGA TGACACGCCA GCAGTTATTC
TTTCGGGTAC AAATGCCGAT TGCCATGCCA CTCATTCTGT CTGGTGTCCG CATTATTGCT
GTTCAAACCG TGGGGTTAGC TGTTGTCGCG GCGCTGATTG GTGCGGGGGG GCTAGGGGCC
ATCGTATTCC AAGGTTTATT AAGCAGTGCT CTGGATTTGG TACTGCTCGG TGTGATCCCC
GTGATAGCGA TGGCGGTCAT TGTGGATTCA CTGTTTAAAT TCATTGTCAT ATTTATGGAT
ATTTCACGTC GATGA
|
|---|
| Protein sequence | MVVKNRVLLT LSILLVLAGA GLAFLSHAPN RLISGQGIML ISLITGPVLW LLAPILGLII
FAFLTPSIAL YWLIILFAEL LLLGLLLLAG ATATQLAGGE ESLVRTSLGG GFWLMSGVSL
LIAIDSLSRV IAHPVWRSLA IALLMLPIIA LLASGQLDQL SLMKEYVNRR DVFDDALWRH
IQILLTTLVP AVVIGIPLGL LCFHSHRLQG AIFSTLNIIQ TIPSIALFGL LIAPLSGLAA
AIPWLAELGI GGIGLAPAII ALVLYALLPL VRNVVAGLEA VPDSVVESAK GMGMTRQQLF
FRVQMPIAMP LILSGVRIIA VQTVGLAVVA ALIGAGGLGA IVFQGLLSSA LDLVLLGVIP
VIAMAVIVDS LFKFIVIFMD ISRR
|
|---|
| |