Gene Csal_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2946 
Symbol 
ID4028341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3284051 
End bp3284818 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID637968153 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_574990 
Protein GI92115062 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0159646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGCC GCACGATGCC ACGTCTGGCG CCGCGCAGCG TGCTGCTGAT CGTTCTCGGC 
GTATTGCTGG TGACGCTGGT CGTGGGCATG GAGCAGTTGG CGCCCTGGTT CCGCGCCTGG
TTTCCCGACC AGAACCCGGC CATGTACGAG CGCGAGAGCT TCCTCAACCT GACGCTGGCC
CATGTGGCGC TGGTCCTGGT GTCCTCGCTC ATTTCGGTGA GCGTGGGCGT CGGCGCGGGT
CTGTTCGTCA CGCGCCCGGC GGGGCGCGAG TTCGCTCCGC TGGTCTCGAC GCTGGCGGCC
ATCGGCCAGA CGTTTCCCCC GGCAGCGGTA CTCGCCATCG TCGTGCCCCT GGCGGGTTTC
GGCTTCGTGC CCACGCTGGT GGCGCTGGTC CTCTACGGGC TGTTGCCCGT GGTGCAGAAC
ACCGTTGCCG GTCTGGGCAC GGTGCCGCCC CAAACCCTCG AAGCGGCACG CGGCAACGGC
ATGAGCGCCT GGCAGATTCT CTGGCACATC GAGCTGCCGC TGGCGATGCG CGTCATCGTC
GCCGGCGTGC GTGTCTCGGT GATCATCAAC ATCGGCACGG CCACCATCGG GTCCACGGTG
GGCGCCACCA CGCTGGGTAC CCCGATCATC GCCGGGCTGG TCGGCAATAA CCTGCCGTAC
GTGATTCAAG GCGCGTTATT GGTGGGCTTG CTCGCCATCG TCACCGACCT GGCATTCGAA
CGCCTGGAAC GACGTTTTTC GTTCGGCGCG AGTGGTGCGA CGCAGTAG
 
Protein sequence
MTRRTMPRLA PRSVLLIVLG VLLVTLVVGM EQLAPWFRAW FPDQNPAMYE RESFLNLTLA 
HVALVLVSSL ISVSVGVGAG LFVTRPAGRE FAPLVSTLAA IGQTFPPAAV LAIVVPLAGF
GFVPTLVALV LYGLLPVVQN TVAGLGTVPP QTLEAARGNG MSAWQILWHI ELPLAMRVIV
AGVRVSVIIN IGTATIGSTV GATTLGTPII AGLVGNNLPY VIQGALLVGL LAIVTDLAFE
RLERRFSFGA SGATQ