Gene Cyan7425_4031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4031 
Symbol 
ID7289979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4063360 
End bp4063977 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content54% 
IMG OID643587003 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002484706 
Protein GI220909395 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00343198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTTATC TGGTTAAAAA TGGCACGATC GTTATCCCGC TGTTGCTCCA GCACTTGCAG 
ATCACGACGC TGGCTTTACT GATCGCCGTG GGAATTGCCC TGCCCCTGGC CTTACTGGTC
TATCACTATC CCCGTCTAAA CATGCCTGTG TTGGGAACGC TGGGGATGCT CTACACAGTG
CCCAGTCTGG CCTTAATGAT TTTACTGATC CCCCTGTTCG GTTTGAACAG GACCACTGTG
GTTACTGCGA TCGTTCTTTA CAGCCAGGTG ATCCTGGTAC GCAATCTCAT TGCTGGTTTA
GAGAGCATTC CCGCTGCCAT TTTAGAGGCC GGTCGGGGCA TGGGCATGAG TGCGTGGCAG
TGCTGGTGGT GGGTGCAGGT GCCGCTGATT CTACCCATTT TTATCGCTGG GGTCAGATTA
GCTGCTGTGG TCGGGATTGG CATTGGCACG ATCGGGGCAA AATTTGGGGC CGGGGGCTTA
GGGGTGTTGT TGTTTGACGG CATTGCCCAG AATCGGGCTG ACAAAATCTG GGCCGGAGCG
ATCGCAGTTG CCATTCTGGC TCTGGGGCTG AACTTTAGTC TCGTTGGACT TGAAAAAGTG
AGCCGATATA GGACTTGA
 
Protein sequence
MVYLVKNGTI VIPLLLQHLQ ITTLALLIAV GIALPLALLV YHYPRLNMPV LGTLGMLYTV 
PSLALMILLI PLFGLNRTTV VTAIVLYSQV ILVRNLIAGL ESIPAAILEA GRGMGMSAWQ
CWWWVQVPLI LPIFIAGVRL AAVVGIGIGT IGAKFGAGGL GVLLFDGIAQ NRADKIWAGA
IAVAILALGL NFSLVGLEKV SRYRT