| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0386 |
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| Symbol | |
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| ID | 3241320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 386108 |
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| End bp | 387622 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637167053 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_187980 |
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| Protein GI | 57866321 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component
[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAGT TCTTTGCGAC ATTAAGTGAT AGAAAAGGGC AGCTATTTTC TACTATAATT
GAACACATTC AACTTTCTTT TATAGCGCTT TTCATTGCAA CTCTTATAGC AGTACCAATT
GCAATTTTGC TCACTAAAAC AAAAAAACTT TCAGAAATCG TCATGAATAT TGCAGCTGTT
CTACAAACAA TTCCATCACT GGCACTACTT GGTTTGATGA TACCAATTTT CGGAATTGGG
AGACTTCCGG CAATTATCGC CTTAGTTGTA TATGCGTTAC TTCCTATTCT ACGTAATACA
TACACAGGTA TTAAGGAGGT CGATCCCTCT CTTATTGAAG CGGCTAAAGG CATTGGAATG
AAACCACTTA GAAGATTGAC CAAAGTCGAA CTCCCTATTG CAATGCCTGT TATCATGGCA
GGAATACGCA CAGCTATGGT ATTAATCATT GGTACTGCTA CACTCGCAGC TTTAATAGGC
GCTGGTGGTC TAGGAGATTT AATATTATTA GGCATTGATC GTAACAATAG TGCACTCATT
TTAATAGGTG CTATTCCAGC TGCACTTCTA GCTATTATTT TTGATTTTAT TTTAAGATAC
ATGGAACGTT TATCATATAA AAAATTGCTC ATTTCTTTAG GGACAATTGT AATTGTGATT
ATCATAGCTA TTGCCATACC TATGGCAGCG CAAAAAGGTG ATAAAATCAC ATTCGCAGGC
AAGCTAGGTT CAGAACCGTC AATTATTACG AATATGTATA AAATACTTAT TGAAGAAGAC
ACAGATGATA CTGTAGAAGT CAAAGATGGC ATGGGTAAAA CCTCATTCTT ATTTAATGCG
CTTAAGTCAG ATGAAATTGA TGGTTATTTA GAATTTACAG GTACTGTATT AGGTGAATTA
ACGAAAGAAG ATTTAAAGTC TAAAAAAGAA AACGATGTAT ATCAACAAGC AAAGTCTAGT
TTAGAAAAAA AATATGATAT GACAATGCTT AAACCGATGA AATATAATAA TACGTATGCA
TTAGCTGTAA AACGTGACTT TGCAAAAAAA TATCAAATTA AGACAATAGG TGATTTACGC
AAGGTAGAAG ATAAACTTAA ACCAGGTTTT ACATTGGAAT TTAATGATAG ACCAGATGGA
TACAAAGCTG TTAAAAAAAC GTATCATCTT AATCTTTCTA ATGTTAAAAC TATGGAACCT
AAATTACGTT ATACTGCAGT TAAAAAGGGA GATATTAATC TCATAGACGC ATACTCTACT
GATGCAGAAT TAAAACAATA TAACATGGTA GTATTAAAAG ATGATCAACA TGTATTTCCT
CCATACCAAG GAGCACCGCT ATTTAAAGAA AAATATTTAA AAGACCATCC TGAAGTTAAA
AAACCGCTCA ATAAATTGGC GAATAGAATC ACAGATGAAG AAATGCAAGA AATGAACTAT
AAGGTAACAG TGAAGAAAGA GGATCCTTAT AAAGTAGCAA GAGAATACTT AGAAAAAGAA
AAATTAATAA AATAA
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| Protein sequence | MNEFFATLSD RKGQLFSTII EHIQLSFIAL FIATLIAVPI AILLTKTKKL SEIVMNIAAV
LQTIPSLALL GLMIPIFGIG RLPAIIALVV YALLPILRNT YTGIKEVDPS LIEAAKGIGM
KPLRRLTKVE LPIAMPVIMA GIRTAMVLII GTATLAALIG AGGLGDLILL GIDRNNSALI
LIGAIPAALL AIIFDFILRY MERLSYKKLL ISLGTIVIVI IIAIAIPMAA QKGDKITFAG
KLGSEPSIIT NMYKILIEED TDDTVEVKDG MGKTSFLFNA LKSDEIDGYL EFTGTVLGEL
TKEDLKSKKE NDVYQQAKSS LEKKYDMTML KPMKYNNTYA LAVKRDFAKK YQIKTIGDLR
KVEDKLKPGF TLEFNDRPDG YKAVKKTYHL NLSNVKTMEP KLRYTAVKKG DINLIDAYST
DAELKQYNMV VLKDDQHVFP PYQGAPLFKE KYLKDHPEVK KPLNKLANRI TDEEMQEMNY
KVTVKKEDPY KVAREYLEKE KLIK
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