| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0705 |
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| Symbol | |
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| ID | 4440092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 688285 |
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| End bp | 689835 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639672562 |
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| Product | ABC-type proline/glycine betaine transport system, permease and substrate binding protein |
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| Protein accession | YP_814535 |
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| Protein GI | 116629363 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component
[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000153769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 110 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAT CTTTATGGCA AATGCTTTTA ACAGAACACG ATCAAATTTG GGCTACGACG
CTTGTTCATA TTAAAATTTC ACTAATTGCT CTCCTTATCG CAATGGTAAT TGCAATTCCG
CTAGCTTTTA TTTTAAAGGG ACATAAAAAA GTAGCTGAAT TCACACTGCA AATTGCTGGT
ATTATTCAAA CTATTCCAAG CTTAGCAATT CTAGGTTTGT TATTACCTTT TGTCGGAATT
GGGACTACAC CTGCGATTAT TGCCTTAGTT TTATATGCAA TAATGCCTAT TTTTCAGAAT
ACTTATTCAG GTTTAACAGA TATTCCTGAT AATTTAGAAG AAGCAGCAAC TGCCTTTGGT
CTGACAAAAT GGAAGAAATT ACAGCGATTA GAAATCCCAA TGGCCATGCC GATGATTTTT
GCTGGAGTTC GAATTGCTTT AGTAATGATT ATTGGTACAG CAACACTTGC AGCCTTAATT
GGTGGTGGTG GACTAGGTAC TTACATTTAT GTCGGCATTA ATTCAAATAA CAATACTGAA
GTTTTAATGG GTGCGATTTT ATCCGCACTG CTTGCCTTAG TATTTAGTGG CGTTTTAAAA
TTTATTGCTA AAAATAATAA GCGACTCAAG TGGGGAAGTA TTATTATCGC TGTAATTTTG
CTCATTTGGG GCGGAAGCAG TTTATATACT CACTTCACTA GCACTTCAAA GAATAATATT
GCTGAACCAA AACAAACAAT TACAATTGCC GGGAAAATGG GCTCTGAGCC AGCTATTTTA
ATTAATATGT ATAAAGACCT GATTGAAAAG AATGATCCAA ATACCAAGGT AGTCTTAAAG
CCTAATTTTG GTGGAACAAC ATTTTTATTT AAGGCTCTTC AGACAGATAA AGTTGATATT
TATCCTGAAT TCACTGGAAC AGTCTTGCAA ACCTTAGTTA AAACAGGTAA AAAGACTGGC
AATGATCCAA ATCAAGTTTA TGTTGAAGCT AGAAGCGATT TAAAGAAACA ATTTGATATG
GAATACTTAA AGCCAATGGC TTATCAAAAC GGTTATGCTT TGGCAACAAC GCAGAAATTT
GCAAAAGACA ACCATTTGAC TAAAATGAGT GATTTAAACC GCGTTAATAA AAAAGTTCAC
GCAGCTTTTG ATCCAGACTT TACTTCTTTA AAAGATGGGT ATCCTGGATT AAAGAAAATT
TATAAGTTGG ATTTTGCATC AATTAAAAGT ACTGAATCAA GTATTCGTTA TCATGCTATT
GCGAATAATC AAGCTAATAT TGTTGATGGC TACACTACTG ATGCCGAGAT TAAAAAGTAT
AACTTAGTAA TGCTTGATGA TGATAAAAAA TTCTTCCCAC CTTATCAAGG TGCTCCGTTG
ATGAAGGCAA AATTTGCAGA GAGAAATCCT CAAATTGTAA AAGCATTAAA CAAACTAGCT
GGTAAAATTA CAACTCAAGA AATGCAGGAA ATGAATTATC AGGTTAATGT TAAGCACGAA
AAGCCAGCTA AAGTGGCTCA TGATTATTTG GTAAAACATG GATTAATTTA G
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| Protein sequence | MIKSLWQMLL TEHDQIWATT LVHIKISLIA LLIAMVIAIP LAFILKGHKK VAEFTLQIAG
IIQTIPSLAI LGLLLPFVGI GTTPAIIALV LYAIMPIFQN TYSGLTDIPD NLEEAATAFG
LTKWKKLQRL EIPMAMPMIF AGVRIALVMI IGTATLAALI GGGGLGTYIY VGINSNNNTE
VLMGAILSAL LALVFSGVLK FIAKNNKRLK WGSIIIAVIL LIWGGSSLYT HFTSTSKNNI
AEPKQTITIA GKMGSEPAIL INMYKDLIEK NDPNTKVVLK PNFGGTTFLF KALQTDKVDI
YPEFTGTVLQ TLVKTGKKTG NDPNQVYVEA RSDLKKQFDM EYLKPMAYQN GYALATTQKF
AKDNHLTKMS DLNRVNKKVH AAFDPDFTSL KDGYPGLKKI YKLDFASIKS TESSIRYHAI
ANNQANIVDG YTTDAEIKKY NLVMLDDDKK FFPPYQGAPL MKAKFAERNP QIVKALNKLA
GKITTQEMQE MNYQVNVKHE KPAKVAHDYL VKHGLI
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