Gene SERP2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2030 
Symbol 
ID3241090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp2050025 
End bp2050660 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content32% 
IMG OID637168716 
Productamino acid ABC transporter, permease protein 
Protein accessionYP_189586 
Protein GI57865410 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.207242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAT TCTTACAAGA ATACGGTAGT CAACTTTTAT CAAAAGCAGT AGAACATTTT 
TATATTTCTA TGTTTGCATT ATTGTTAGCG ATTGTAGTAG CTGTCCCTTT AGGTATTTTA 
TTATCAAAAA CGCAACGCAC AGCTAATGTG GTATTAACAG TTGCTGGCGT GCTTCAAACC 
ATTCCTACTT TGGCTGTGTT AGCTATCATG ATTCCAATAT TTGGGGTAGG AAAAACACCA 
GCTATTGTTG CATTATTTAT CTATGTATTA TTACCAATTT TAAATAATAC AGTATTAGGT 
GTTAAAAATA TCGATAAAAA TGTCATTCAA GCTGGTCAAA GTATGGGAAT GACTAAATTT 
CAATTAATGA AAGATGTAGA AATGCCTTTA GCTTTACCAC TTATTATTAG TGGTATTCGT 
CTATCAAGTG TATACGTCAT TAGTTGGGCA ACACTCGCAA GTTATGTAGG TGCAGGTGGA 
CTTGGGGATC TTGTATTTAA TGGATTAAAT CTCTATCAAC CACCTATGAT TATTAGTGCA 
GCGATTGTTG TTACTTTATT AGCATTAGTT ATTGACTTTA TACTTTCATT AGTTGAAAAA 
TGGGTTGTAC CTAAAGGATT AAAAGTATCT AGATAA
 
Protein sequence
MKAFLQEYGS QLLSKAVEHF YISMFALLLA IVVAVPLGIL LSKTQRTANV VLTVAGVLQT 
IPTLAVLAIM IPIFGVGKTP AIVALFIYVL LPILNNTVLG VKNIDKNVIQ AGQSMGMTKF 
QLMKDVEMPL ALPLIISGIR LSSVYVISWA TLASYVGAGG LGDLVFNGLN LYQPPMIISA 
AIVVTLLALV IDFILSLVEK WVVPKGLKVS R