| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0914 |
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| Symbol | |
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| ID | 4432077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 858348 |
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| End bp | 859850 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639666673 |
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| Product | choline ABC transporter permease and substrate binding protein |
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| Protein accession | YP_808884 |
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| Protein GI | 116511668 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component
[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.222381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAT TAATTTCAAC TTTTCAAAAT CAGCAAGGAC AATTTTGGCA AGCATTTTTG
GAACATATTC AAATCTCACT CATTTCAATT TTTATTGCGA TTTTGATTTC GATTCCCTTA
GCCCTCTTAC TTCGACGTTT TCCGAAAATT GCCGAACCGA TTTTGCAAGT CACAGGAATT
TTTCAAACCA TTCCTAGTTT AGCTCTTTTG GGATTATTAA TTCCATTTAT CGGAATTGGA
AGTTTACCAG CCATTGTTGC ACTTGTTGTT TATGCGATTT TTCCAATTGT TCAAAATACA
TATACGGGTT TAGAGCAAAT TGAACCTTCC TTGATTGAGG CCGCAACGGC ATTTGGGATG
AATCGCAGGG AACGACTGAT GAAATTTGAA CTCTCATTGG CAATGCCCTT TATCATGGCA
GTAATTCGGA CGAGTACAGT TATGGTCATT GGTACCGCGA CACTCGCTGC CCTGATTGGC
GCTGGAGGTT TAGGAAACTT TATTCTTCTT GGAATAAATA TGAATGATGT TTCATTGATT
TTGATTGGAG CCATTTCGTC AGCCTTGTTG GCGATCATTT TCAGTAGTCT TTTGAAATTT
TTAGAGAAGG CAAAGATAAG AACAATTCTC ATTAGTTTTT TCATTGGTTT ACTCGTGTTG
GGAGGTTCTT ACTATCGCCC TCAAACTTCT GACCATCCAC AAATTACAAT TGCAGGTAAA
TTAGGAGCTG AACCTGATGT ATTGATTAAC ATGTACAAGT TACTTATTGA GAAGGATAGT
AATATTCGTG TCAATTTAAA ATCAAATTTT GGTGATACGA CTTTCCTCTA TAATGCCTTA
AAAGCAGGAA AAATTGATAT CTATCCTGAA TACACAGGGA CGATTACTTC TACATTTTTA
AAAGACCCAG TTAATTCTAC TGACCCGGCT GTAGTTTGGC AAAAAGCAGA AGAAGGCATT
AAAAAACTCA ATCAATTTAC CTACCTATCA CCAATGAAAT TTCAAGATAC TTATGCTCTT
GCTGTCAAAT CTGATTTTGC TAAAGAACAT CAGCTCACGA AAATTTCTGA TTTGCCTAAC
TTTTCAGGAT TAACTGCAGG TTTTGATGTT GAATTTGCTA ATCGTTCAGA TGGAAATATT
GGCTTGAAAA AACTATATGG ACTTGATTTA AATGTCAAAA CCATGCAAAG TAGTCTGATT
TATAATGCCT TAAACTCTGG GGCTGTGAAT GTCGCTGAAG TATATTCTAC TGACAGCCAA
ATTAAACAAT ATAATCTTAC TGTTTTAAAA GATGATAAGA ACCTTTTTCC ACCTTATCAA
GCAGCACCAC TGATGAAAGA AAGTTTATTA AAAAAATATC CTGAACTCAA GAAGATTCTC
AATAAACTGT CAGGAAAAAT TACTGACCAA GAGATGATTG AGATGAACTA TGATGTTAAT
GTTAAGCAGG AAGACGCTTC AAAAGTAGCA GAAAGATATT TAAAAGCTAA AGGATTAATT
TAA
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| Protein sequence | MSQLISTFQN QQGQFWQAFL EHIQISLISI FIAILISIPL ALLLRRFPKI AEPILQVTGI
FQTIPSLALL GLLIPFIGIG SLPAIVALVV YAIFPIVQNT YTGLEQIEPS LIEAATAFGM
NRRERLMKFE LSLAMPFIMA VIRTSTVMVI GTATLAALIG AGGLGNFILL GINMNDVSLI
LIGAISSALL AIIFSSLLKF LEKAKIRTIL ISFFIGLLVL GGSYYRPQTS DHPQITIAGK
LGAEPDVLIN MYKLLIEKDS NIRVNLKSNF GDTTFLYNAL KAGKIDIYPE YTGTITSTFL
KDPVNSTDPA VVWQKAEEGI KKLNQFTYLS PMKFQDTYAL AVKSDFAKEH QLTKISDLPN
FSGLTAGFDV EFANRSDGNI GLKKLYGLDL NVKTMQSSLI YNALNSGAVN VAEVYSTDSQ
IKQYNLTVLK DDKNLFPPYQ AAPLMKESLL KKYPELKKIL NKLSGKITDQ EMIEMNYDVN
VKQEDASKVA ERYLKAKGLI
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