| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1223 |
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| Symbol | |
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| ID | 7112356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 1341935 |
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| End bp | 1343473 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643479491 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_002376539 |
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| Protein GI | 218438210 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component
[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT TAACAGAAAT TTGGTGGCGT ACAGCAGAAC ATTTGCTCTT AGTTGCCCTG
GCAATCGGAG TAGCGATCGC AGTAGGATTA CCTCTAGGGA TTGTGATTAC CCGTTATCCG
AAACTGGTTA AACCGGTTCT GGGTGTTGCC AATGGAATTC AGACGATACC GAGTCTTGCT
ATTTTTGGTT TTTTGCTATC AGTTCCCCTC TTAGGCGGTA TTGGCAAAAT TCCTGCTATT
GTGGCTTTAA TTCTCTATGC TTTGTTGCCG ATTATTCGTA ATACTTATAC GGGGATTACC
AGCGTAGATC CGGCCATTCG AGAAGCGGCT AAAGGAATGG GGATGAATGA AAAACAGATT
TTATTACAAG TAGAAATCCC TTTAGCTTTA GGAATTATTT TAGCCGGGGT AAGAATTTCA
ACAGTGATTT GTGTGGGAAT TGCCACCATT GCAGCAGCGA TCGGGGGAGG AGGTTTAGGA
GTATTTATTT TTCGAGGGAT TGCAACCGTT AATAATCAAT TAATTTTAGC CGGTGCTATT
CCTGCGGCTG TAATTGCCTT ATTAGCTGAT GGGGGAATTG GATGGTTAGA GAAAAGATTA
ACTCCTCCTT ATCGACAAAA ATTAAGGGTT AATAAGAGAC GTTTTTTGAT AGGGTTGGGA
TTACTGGGTT TATTATTAAT TAGTTTATGG GCGATAACTC ATCAACGAAC TTCTCAAGTT
AGTTCAGGTG GGGGAACAGT TATTATTGGC TCTAAAAATT TTACGGAACA GGTAATTTTA
GGCGAACTTC TCGCCCAAGA AATAGAGGCT AAAACTAATT TAACCGTAGA TCGTCGTTTA
AATTTGGGGG GAACATTTAT CTGTCATGAA GCAGTTAAAA CCGGGCAAAT TGACGGTTAT
GTAGAATATA CGGGAACATC TTATACTGCT ATTCTCAAGA AAAATCCGAT TAGCGATCGG
GAGAAAGTGT ATCAGCAGGT TAAACAATTT TATGGAGATC AATTAAATTT AGAAGTCTTT
CCATCATTGG GTTTTGAGAA TACTTATGCT ATTGTTATTC GTCGAGAATA TGCCGAAAAA
TATCAGGTTA AAACTCTTTC AGAAATAGCC AAATATACCC CCAATTGGAA AGCCGGTTTT
GGCCATGAAT TTTTAAGTAG AAAAGATGGT TATCCAGGGT TAGCGAAAAC TTACGGATTA
AAATTTGCTC AACCTCCAGA GGCGATGGAA TTAGGGTTAA TCTATCAGGC CATATCTCAG
AAACAAGTCG ATTTAGTCGC AGGAAGTTCA ACAGATGGAT TAATTCCAGT CTTAAATTTA
GTAATTTTAG AGGATGATAA ACGTTATTTT CCTCCCTATG ATGCTGTGCC AATTTTTAAT
AAAAATACTT TAGAGAAATA TCCTCAGTTA GAAAAAGTTA TTTCTGAGTT AGGGGGGTTT
ATTTCTGCCG AAGAGATGCA ACAGTTAAAT TATCAAGTGG ATAGTCAAGC TAGAGAGGTT
GAGGAAGTAG TTAAGGAATT TTTAAAGGCA AAAACATAA
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| Protein sequence | MNDLTEIWWR TAEHLLLVAL AIGVAIAVGL PLGIVITRYP KLVKPVLGVA NGIQTIPSLA
IFGFLLSVPL LGGIGKIPAI VALILYALLP IIRNTYTGIT SVDPAIREAA KGMGMNEKQI
LLQVEIPLAL GIILAGVRIS TVICVGIATI AAAIGGGGLG VFIFRGIATV NNQLILAGAI
PAAVIALLAD GGIGWLEKRL TPPYRQKLRV NKRRFLIGLG LLGLLLISLW AITHQRTSQV
SSGGGTVIIG SKNFTEQVIL GELLAQEIEA KTNLTVDRRL NLGGTFICHE AVKTGQIDGY
VEYTGTSYTA ILKKNPISDR EKVYQQVKQF YGDQLNLEVF PSLGFENTYA IVIRREYAEK
YQVKTLSEIA KYTPNWKAGF GHEFLSRKDG YPGLAKTYGL KFAQPPEAME LGLIYQAISQ
KQVDLVAGSS TDGLIPVLNL VILEDDKRYF PPYDAVPIFN KNTLEKYPQL EKVISELGGF
ISAEEMQQLN YQVDSQAREV EEVVKEFLKA KT
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