| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2215 |
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| Symbol | |
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| ID | 5193533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2517920 |
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| End bp | 2518768 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586672 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001267538 |
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| Protein GI | 148547436 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.636525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGCG GTTTCCCGCA GACCCTGCAG TTTTCCTTTG CCGACAGCAT CAACCGCCTG
GTCGACGGGT TGGTATTGAA CTACGGCGAC CACCTGCGCA GTTTTTCTGA CCAGTTGCTG
CAACTGCTGG TCGGCCTGGA GAACCTGTTG CGACTGTTGC CTTGGTGGCT GTTGTTGTTG
CTGGTGGGTC TGCTGGCCTG GCACGCCAGC CGCAGCCTGC TGCGCAGCGC CGTGCTGGTC
GCGCTGCTGG CCTTGATCGG TATGCTCGGG CTCTGGGACA AGCTGCTGCA GACCCTGGCC
CTGGTGCTGG TCAGTACCGG CCTGTGCGTA CTGGTGGGTG TACCGCTGGG CATCCTGCTG
GCTGCCCGGC CACTGGCCAG GCGGCTGCTG TTGCCGGTAC TCGATGTGAT GCAGACGCTA
CCTGCGTTCG TTTACCTGAT CCCGGTGCTG ATGCTGTTTG GCCTGGGCAA GGTGCCTGCC
GTGTTCGCCA CGCTGATCTA CGCCCTGCCG CCGCTGGTGC GGTTGACCGA GCTGGGCTTG
AGCCAGATCG ACCCCTCGTT GTTGCAGGCC GCACACGGCC TTGGCGCCAG CCGCTGGCAG
CGGTTGCGGC GCATCGCCCT GCCCCTGGCG CTGCCGAGCA TCATGGCCGG GCTCAACCAG
TCGGTCATGA TGGCCTTGTC GATGGTGGTC GTGGCGTCGA TGATCGGCGC CCGTGGGTTG
GGTGAGGATG TGCTGGCGGG GATCCAGACC TTGAATGTTG GCCAAGGGAT GGAGGCCGGG
CTGGCAATTG TCGCCCTGGC CATGGTGATC GACCGGATCA GCCAGGCCTA TGGGCGCAGT
CGTCGCTGA
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| Protein sequence | MSSGFPQTLQ FSFADSINRL VDGLVLNYGD HLRSFSDQLL QLLVGLENLL RLLPWWLLLL
LVGLLAWHAS RSLLRSAVLV ALLALIGMLG LWDKLLQTLA LVLVSTGLCV LVGVPLGILL
AARPLARRLL LPVLDVMQTL PAFVYLIPVL MLFGLGKVPA VFATLIYALP PLVRLTELGL
SQIDPSLLQA AHGLGASRWQ RLRRIALPLA LPSIMAGLNQ SVMMALSMVV VASMIGARGL
GEDVLAGIQT LNVGQGMEAG LAIVALAMVI DRISQAYGRS RR
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