Gene Csal_2353 details

Gene Information

• Locus tag: Csal_2353
• ID: 4027462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 2644206
• End bp: 2644868
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637967557
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_574401
• Protein GI: 92114473
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1174] ABC-type proline/glycine betaine transport systems, permease component

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAATTAC TGCAATATTT TCTCGACAAT CTCGAGTTGC TGGGGACCCT CACCCTCGAG 
CACATCAGTC TGGTGGGTGT CGCGGTGGGG ATCGCCACGC TGACCGGCGT TCCCATCGGC 
ATCGCCATCA CCAAGAACGA GCGCATCGCC AAGACCGTGC TCTACATCGC CTCGATCATC 
GTGACCATTC CCTCCATCGC GCTGTTCGGG ATCATGATTC CGATCCTCTC GATCATCGGC 
CAGGGCATCG GCTACATGCC GGCGGTCATC GCGGTGCTGC TGTACTCGCA GCTGCCGATC 
ATCCGCAACA CCTACACCGC CATCAACAAC GTCGACCCGG CCCTGCGCGA AGCCGCGCGC 
GGCGTGGGCA TGAGCCAGAA CCAGCGCCTG CGCATGGTCG AGATTCCGCT CGCCGTGCCG 
GTGATCATGG CCGGCGTGCG TACCGCCGTG GTGCTCAACA TCGGCGTCAT GGCGATCGCC 
GCCTACATCG GCGCCGGCGG GCTCGGCACG CTCATCAGCC GCGGCATTTC CCAGTCCGAT 
CCCCGTCAGC TGATCCTCGG CGCCGTGGCC GTCAGCGTGT TGGCGATCAT CGTCGACTAT 
GCGCTGCTGG CCCTGCAGAA GCGGCTGACG CCCAAGGGCA TGGAACGCGC CGCCACCACC 
TGA 

 

Protein sequence

MELLQYFLDN LELLGTLTLE HISLVGVAVG IATLTGVPIG IAITKNERIA KTVLYIASII 
VTIPSIALFG IMIPILSIIG QGIGYMPAVI AVLLYSQLPI IRNTYTAINN VDPALREAAR 
GVGMSQNQRL RMVEIPLAVP VIMAGVRTAV VLNIGVMAIA AYIGAGGLGT LISRGISQSD 
PRQLILGAVA VSVLAIIVDY ALLALQKRLT PKGMERAATT