| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0119 |
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| Symbol | |
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| ID | 5744269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 159135 |
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| End bp | 160706 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641291207 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001557247 |
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| Protein GI | 160878279 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component
[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000124345 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCA TAGAATATAT TACAAATAAT TACGAGCAAA TATTAAGACT TCTATTGGAG
CATATAAAAC TTACCGCAAT TTCTGTTGGT TTTGCCATAT TGATAGGGGT ACCGTTAGGA
ATATTAATCT CTTATGCAAA AAGGGTGAGT AAGCCAATTT TAATGGTAGC AAACATAATA
CAAGCAATTC CTAGTATGGC ATTGCTAGGC TTTATGATTC CATTTTTAGG GATTGGTATG
GTTCCAGCAA TAGTAGCTGT TATCTTGTAT TCTCTCTTAC CTATCATTAA AAACACATAT
ACTGGAATCG ATAATATCAA TCCACAAACA TTGGAAGCTG CAAAAGGTAT TGGATTAACC
CCGTTTCAGG TGTTGACCAA GGTTCAAATA CCTCTTGCAT TACCGGTTAT TATGGCAGGT
GTAAGAATTG CTTCTGTAAC TGCAGTCGGC TTAATGACTA TGGCTGCCTT TATAGGTGCA
GGAGGACTAG GGCATCTTGT CTTTTCAGGA ATTAGAACAG TAAATAACAA TCAGATCTTA
GCTGGAGCGA TCCCTGCATG TTTACTTGCA TTATTAGTTG ACTTCTTGCT TGGACTTGTT
GAGCAGTTGG TAGCACCGAT TAGTTTGCAA AAAGGTGAAA ATAACGTGAA AAAGAAAAAG
CGTGGTATAC AAAAAGGCAT TCTTGCAGGA GCAGTATTTG CTATTATAGC CATTTTTGTT
TTTACTGCAA AAGGAACAAA TGCAAATAAT CAAAAAGTTA TTACGATAGG CTCCAAAGAT
TTTACAGAGC AGGCTATCCT TGGTAATCTT GTTGCAGATC TTATTGAAGG CAATACGGAT
ATTAAAGTGA ATAGAAAGCT TGACCTTGGT GGAACGCAAG TTTGTTTCTC AGCTTTAAAC
AAAGGTGAGA TTGATATGTA TGTAGAATAT AGTGGAACAG CATATTTAAG TGCCTTAGGT
CATACAGAAA AGAAAGATAA AGACCAGGTA TTTGATATTG TAAAAGATGA ATTCAAATCA
AAGTATAATA TTGATGTTCT AAAACAGATG AATTTCAATA ATACCTATGC ATTAGCGGTA
ACGAAAGAGG CCGCAGCGAA GTACCAACTT AAGAATATAA GTGATTTAGC AAAAATTGCC
CAAACGATGA AATCTGGTAC AACTTTTGAA TTCTTAAACC GAGAAGATGG ATTACCTGGC
TTACAAAAGG AATATGGATT TACCATTGGA GAAACCGTTG CAATAGATGG GGCTCCAAGA
TACACGGCAC TTGTAAATAA AGATGTGGAC ATAATAGATG CTTTTACTAC AGATGGGTTA
TTAAAAAAAT TCGGATTAGC TGTGTTAGAA GATGATAAAG CATTCTTCCC ACCTTACTAT
GCTATGCCAA TTGTTCGTTC GGAGAGCTTA GAACAACACC CAGAGATAAT ACCACTCCTA
GAAGAGTTAG GGGATGTATT AACGAATGAT ATTATGCTTG AACTAAATTA TCAGGTGGAT
GAGCTGCAAA AAAGCCCTGA AGCTGTAGCA AAGGAATTTT TGAAGAATCA AAATTTAATT
CCTTCAAAAT AA
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| Protein sequence | MNFIEYITNN YEQILRLLLE HIKLTAISVG FAILIGVPLG ILISYAKRVS KPILMVANII
QAIPSMALLG FMIPFLGIGM VPAIVAVILY SLLPIIKNTY TGIDNINPQT LEAAKGIGLT
PFQVLTKVQI PLALPVIMAG VRIASVTAVG LMTMAAFIGA GGLGHLVFSG IRTVNNNQIL
AGAIPACLLA LLVDFLLGLV EQLVAPISLQ KGENNVKKKK RGIQKGILAG AVFAIIAIFV
FTAKGTNANN QKVITIGSKD FTEQAILGNL VADLIEGNTD IKVNRKLDLG GTQVCFSALN
KGEIDMYVEY SGTAYLSALG HTEKKDKDQV FDIVKDEFKS KYNIDVLKQM NFNNTYALAV
TKEAAAKYQL KNISDLAKIA QTMKSGTTFE FLNREDGLPG LQKEYGFTIG ETVAIDGAPR
YTALVNKDVD IIDAFTTDGL LKKFGLAVLE DDKAFFPPYY AMPIVRSESL EQHPEIIPLL
EELGDVLTND IMLELNYQVD ELQKSPEAVA KEFLKNQNLI PSK
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