Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2785 |
Symbol | |
ID | 5385809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3148261 |
End bp | 3149415 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640865778 |
Product | quaternary amine ABC transporter permease |
Protein accession | YP_001401749 |
Protein GI | 153949593 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTAA AAAACCGGGT TTTGCTAACA CTGTCTATTT TATTGGTTTT AGCAGGCGCG GGGCTTGCCT TTCTTAGTCA TGCTCCTAAT CGATTGATTT CCGGACAGGG GATCATGCTG ATATCGCTAA TAACCGGTCC TGTCCTGTGG CTGTTAGCAC CGATACTGGG GTTAATTATC TTTGCTTTTC TCACTCCCAG CATCGCCCTC TATTGGTTGA TTATCTTGTT TGCAGAGCTG CTGTTATTGG GTTTACTGCT ATTGGCGGGT GCCACCGCAA CTCAATTGGC CGGAGGCGAA GAGAGCCTCG TCCGCACGTC ATTAGGTGGC GGGTTTTGGT TGATGAGTGG GGTGAGTCTC TTGATTGCTA TCGACAGCTT ATCCCGCGTC ATTGCTCATC CAGTCTGGCG CAGTTTAGCC ATTGCTTTGT TGATGCTACC AATCATTGCA TTGCTGGCAA GTGGGCAATT AGATCAACTG TCATTAATGA AGGAATATGT GAATCGTCGG GACGTATTTG ATGATGCCCT ATGGCGGCAC ATCCAAATAC TACTGACTAC GTTAGTTCCG GCAGTGGTTA TCGGCATTCC TCTTGGTTTA CTTTGTTTTC ACTCTCACCG TTTACAAGGC GCTATTTTTT CGACGCTAAA CATTATTCAA ACGATCCCAT CGATTGCCCT ATTTGGTTTG CTGATTGCAC CATTGTCAGG GTTGGCCGCC GCTATCCCTT GGCTTGCTGA ACTGGGTATC GGTGGCATTG GCTTAGCGCC TGCAATTATC GCACTGGTGC TGTACGCCTT ATTACCCTTA GTGCGTAATG TGGTTGCCGG ATTAGAGGCT GTCCCCGACA GTGTGGTGGA GTCAGCCAAA GGTATGGGGA TGACACGCCA GCAGTTATTC TTTCGGGTAC AAATGCCGAT TGCCATGCCA CTCATTCTGT CTGGTGTCCG CATTATTGCT GTTCAAACCG TGGGGTTAGC TGTCGTCGCG GCGCTGATTG GTGCGGGGGG GCTAGGGGCC ATCGTATTCC AAGGTTTATT AAGCAGTGCT CTGGATTTGG TACTGCTCGG TGTGATCCCC GTGATAGCGA TGGCGGTCAT TGTGGATTCA CTGTTTAAAT TCATTGTCAT ATTTATGGAT ATTTCACGTC GATGA
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Protein sequence | MAVKNRVLLT LSILLVLAGA GLAFLSHAPN RLISGQGIML ISLITGPVLW LLAPILGLII FAFLTPSIAL YWLIILFAEL LLLGLLLLAG ATATQLAGGE ESLVRTSLGG GFWLMSGVSL LIAIDSLSRV IAHPVWRSLA IALLMLPIIA LLASGQLDQL SLMKEYVNRR DVFDDALWRH IQILLTTLVP AVVIGIPLGL LCFHSHRLQG AIFSTLNIIQ TIPSIALFGL LIAPLSGLAA AIPWLAELGI GGIGLAPAII ALVLYALLPL VRNVVAGLEA VPDSVVESAK GMGMTRQQLF FRVQMPIAMP LILSGVRIIA VQTVGLAVVA ALIGAGGLGA IVFQGLLSSA LDLVLLGVIP VIAMAVIVDS LFKFIVIFMD ISRR
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