221 homologs were found in PanDaTox collection
for query gene ECH74115_5412 on replicon NC_011353
Organism: Escherichia coli O157:H7 str. EC4115



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001509  ECD_03837  pyruvate formate lyase II activase  99.64 
 
 
292 aa  574  1.0000000000000001e-163  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03786  hypothetical protein  99.64 
 
 
292 aa  574  1.0000000000000001e-163  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5412  pyruvate formate lyase II activase  100 
 
 
279 aa  575  1.0000000000000001e-163  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4186  pyruvate formate lyase II activase  99.64 
 
 
292 aa  574  1.0000000000000001e-163  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4491  pyruvate formate lyase II activase  99.28 
 
 
292 aa  572  1.0000000000000001e-162  Escherichia coli E24377A  Bacteria  normal  0.730323  n/a   
 
 
-
 
CP001637  EcDH1_4034  glycyl-radical enzyme activating protein family  98.21 
 
 
292 aa  567  1e-161  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4064  pyruvate formate lyase II activase  98.57 
 
 
292 aa  570  1e-161  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_4399  pyruvate formate lyase II activase  98.21 
 
 
292 aa  566  1e-160  Escherichia coli SMS-3-5  Bacteria  normal  0.710487  normal  0.473369 
 
 
-
 
NC_010658  SbBS512_E4438  pyruvate formate lyase II activase  97.85 
 
 
292 aa  565  1e-160  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4520  pyruvate formate lyase II activase  80.07 
 
 
292 aa  466  9.999999999999999e-131  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.000270977 
 
 
-
 
NC_011080  SNSL254_A4446  pyruvate formate lyase II activase  79.71 
 
 
292 aa  463  1e-129  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.193926 
 
 
-
 
NC_013517  Sterm_1938  glycyl-radical enzyme activating protein family  41.7 
 
 
273 aa  234  1.0000000000000001e-60  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.239617  n/a   
 
 
-
 
NC_013421  Pecwa_3715  glycyl-radical enzyme activating protein family  36 
 
 
316 aa  197  2.0000000000000003e-49  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1073  glycyl-radical enzyme activating protein family  32.99 
 
 
298 aa  188  9e-47  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.949815  n/a   
 
 
-
 
NC_002939  GSU2102  pyruvate formate-lyase-activating enzyme, putative  36.03 
 
 
298 aa  184  1.0000000000000001e-45  Geobacter sulfurreducens PCA  Bacteria  normal  0.510382  n/a   
 
 
-
 
NC_012917  PC1_3544  glycyl-radical enzyme activating protein family  32.8 
 
 
316 aa  184  2.0000000000000003e-45  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4091  glycyl-radical enzyme activating protein family  34.58 
 
 
305 aa  182  5.0000000000000004e-45  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2477  glycyl-radical enzyme activating protein family  35.74 
 
 
310 aa  181  1e-44  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.731109  normal 
 
 
-
 
NC_004116  SAG0325  pyruvate formate-lyase-activating enzyme  36.72 
 
 
258 aa  181  1e-44  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.719518  n/a   
 
 
-
 
NC_013926  Aboo_0168  glycyl-radical enzyme activating protein family  35.12 
 
 
303 aa  178  9e-44  Aciduliprofundum boonei T469  Archaea  normal  0.465492  n/a   
 
 
-
 
NC_007498  Pcar_1396  glycerol dehydratase activating enzyme  34.11 
 
 
322 aa  177  1e-43  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.214688  n/a   
 
 
-
 
NC_007925  RPC_1176  glycyl-radical activating protein  33.45 
 
 
306 aa  171  1e-41  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0207  glycyl-radical activating family protein  33.22 
 
 
306 aa  170  2e-41  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3258  glycyl-radical enzyme activating protein family  33.11 
 
 
303 aa  169  7e-41  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.807185  n/a   
 
 
-
 
NC_011830  Dhaf_1247  glycyl-radical enzyme activating protein family  32.07 
 
 
299 aa  168  1e-40  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2752  glycyl-radical activating family protein  32.78 
 
 
310 aa  166  2.9999999999999998e-40  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4904  glycyl-radical enzyme activating protein family  35.19 
 
 
327 aa  167  2.9999999999999998e-40  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1438  glycyl-radical enzyme activating protein family  35.47 
 
 
301 aa  165  5.9999999999999996e-40  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2500  glycyl-radical enzyme activating protein family  35.76 
 
 
294 aa  163  3e-39  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1272  radical-activating enzyme  34.55 
 
 
309 aa  162  4.0000000000000004e-39  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0916  pyruvate-formate lyase-activating enzyme  32.28 
 
 
306 aa  161  9e-39  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0858803  n/a   
 
 
-
 
NC_013173  Dbac_2365  glycyl-radical enzyme activating protein family  33.22 
 
 
306 aa  161  1e-38  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.00000514278  n/a   
 
 
-
 
NC_008751  Dvul_0490  glycyl-radical activating family protein  33.11 
 
 
307 aa  159  5e-38  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.164514 
 
 
-
 
NC_013173  Dbac_2144  glycyl-radical enzyme activating protein family  33.57 
 
 
298 aa  158  9e-38  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1175  glycyl-radical activating family protein  33.21 
 
 
263 aa  155  7e-37  Clostridium phytofermentans ISDg  Bacteria  normal  0.0579151  n/a   
 
 
-
 
NC_013421  Pecwa_3460  glycyl-radical enzyme activating protein family  37.64 
 
 
330 aa  154  2e-36  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0943  pyruvate-formate lyase-activating enzyme  32.66 
 
 
318 aa  153  2.9999999999999998e-36  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0115559  n/a   
 
 
-
 
NC_009253  Dred_2966  glycyl-radical activating family protein  31.86 
 
 
297 aa  152  4e-36  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3281  radical-activating enzyme  33.23 
 
 
320 aa  152  5e-36  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3029  glycyl-radical enzyme activating protein family  30.18 
 
 
260 aa  152  7e-36  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3054  radical-activating enzyme  32.03 
 
 
302 aa  149  5e-35  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.969131  n/a   
 
 
-
 
NC_011830  Dhaf_0367  glycyl-radical enzyme activating protein family  31.5 
 
 
310 aa  148  1.0000000000000001e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1358  glycyl-radical enzyme activating protein family  32.12 
 
 
310 aa  147  1.0000000000000001e-34  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3704  glycyl-radical enzyme activating protein family  28.76 
 
 
304 aa  147  2.0000000000000003e-34  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1586  glycyl-radical enzyme activating protein family  33.33 
 
 
314 aa  147  2.0000000000000003e-34  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0487316  n/a   
 
 
-
 
NC_007517  Gmet_1541  glycyl-radical activating protein  33.11 
 
 
348 aa  144  1e-33  Geobacter metallireducens GS-15  Bacteria  normal  0.883211  normal  0.703307 
 
 
-
 
NC_013457  VEA_001155  pyruvate formate-lyase activating enzyme  31.6 
 
 
309 aa  144  2e-33  Vibrio sp. Ex25  Bacteria  hitchhiker  0.000234207  n/a   
 
 
-
 
NC_009253  Dred_3277  glycyl-radical activating family protein  32.36 
 
 
318 aa  143  3e-33  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2641  glycyl-radical activating family protein  33.56 
 
 
299 aa  143  3e-33  Serratia proteamaculans 568  Bacteria  normal  hitchhiker  0.00101807 
 
 
-
 
NC_009943  Dole_2192  glycyl-radical activating family protein  31.32 
 
 
307 aa  142  6e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00791  predicted pyruvate formate lyase activating enzyme  34.3 
 
 
308 aa  136  3.0000000000000003e-31  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00808  hypothetical protein  34.3 
 
 
308 aa  136  3.0000000000000003e-31  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E2524  glycyl-radical enzyme activating protein family  33.98 
 
 
308 aa  135  6.0000000000000005e-31  Shigella boydii CDC 3083-94  Bacteria  normal  0.275532  n/a   
 
 
-
 
NC_010001  Cphy_1418  glycyl-radical activating family protein  31.8 
 
 
315 aa  134  9.999999999999999e-31  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_17450  glycyl-radical enzyme activator family protein  32.33 
 
 
311 aa  135  9.999999999999999e-31  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.478583  normal 
 
 
-
 
NC_011094  SeSA_A0995  glycyl-radical enzyme activating protein family  34.45 
 
 
299 aa  135  9.999999999999999e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_2820  glycyl-radical activating family protein  34.78 
 
 
299 aa  134  1.9999999999999998e-30  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_0849  glycyl-radical activating family protein  34.78 
 
 
299 aa  134  1.9999999999999998e-30  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0882  glycyl-radical activating family protein  34.78 
 
 
299 aa  134  1.9999999999999998e-30  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0885  glycyl-radical enzyme activating protein family  34.11 
 
 
299 aa  132  3.9999999999999996e-30  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1318  glycyl-radical activating family protein  34.56 
 
 
299 aa  132  3.9999999999999996e-30  Enterobacter sp. 638  Bacteria  normal  0.0352967  normal 
 
 
-
 
NC_011083  SeHA_C0974  glycyl-radical enzyme activating protein family  34.11 
 
 
299 aa  132  3.9999999999999996e-30  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.232079  normal 
 
 
-
 
NC_011080  SNSL254_A0912  glycyl-radical enzyme activating protein family  34.11 
 
 
299 aa  132  6e-30  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0945  glycyl-radical enzyme activating protein  34.11 
 
 
299 aa  132  6e-30  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_2818  glycyl-radical enzyme activating protein family  34.45 
 
 
299 aa  132  6.999999999999999e-30  Escherichia coli DH1  Bacteria  normal  0.0425809  n/a   
 
 
-
 
NC_009801  EcE24377A_0895  glycyl-radical activating family protein  34.45 
 
 
299 aa  132  6.999999999999999e-30  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0974  glycyl-radical enzyme activating protein  33.89 
 
 
299 aa  131  1.0000000000000001e-29  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1435  glycyl-radical enzyme activating protein family  34.06 
 
 
312 aa  126  3e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0980  glycyl-radical activating family protein  32.38 
 
 
297 aa  125  7e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.131362 
 
 
-
 
NC_013521  Sked_16340  pyruvate formate-lyase 1-activating enzyme  28.73 
 
 
287 aa  124  2e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.243728  normal 
 
 
-
 
NC_009012  Cthe_0506  pyruvate formate-lyase activating enzyme  28.46 
 
 
238 aa  113  3e-24  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0339577  n/a   
 
 
-
 
NC_010001  Cphy_2820  pyruvate formate-lyase activating enzyme  26.39 
 
 
250 aa  113  4.0000000000000004e-24  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000000272816  n/a   
 
 
-
 
NC_008700  Sama_1497  pyruvate formate lyase-activating enzyme 1  25.55 
 
 
246 aa  109  4.0000000000000004e-23  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_23160  pyruvate formate-lyase activating enzyme  26.49 
 
 
247 aa  109  6e-23  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2474  pyruvate formate lyase-activating enzyme 1  24.63 
 
 
245 aa  108  1e-22  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1049  pyruvate formate lyase activating enzyme  29.48 
 
 
246 aa  105  9e-22  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2884  pyruvate formate lyase-activating enzyme 1  25.37 
 
 
246 aa  104  1e-21  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00506631  hitchhiker  0.00000444162 
 
 
-
 
NC_011898  Ccel_2581  pyruvate formate-lyase activating enzyme  28.46 
 
 
240 aa  105  1e-21  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1422  pyruvate formate lyase-activating enzyme 1  25.55 
 
 
246 aa  104  1e-21  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1707  pyruvate formate lyase-activating enzyme 1  25.65 
 
 
246 aa  104  1e-21  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0231805 
 
 
-
 
NC_011729  PCC7424_2837  pyruvate formate-lyase activating enzyme  29.92 
 
 
255 aa  104  2e-21  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.128251 
 
 
-
 
NC_013515  Smon_0297  pyruvate formate-lyase activating enzyme  25.28 
 
 
247 aa  103  3e-21  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010498  EcSMS35_2219  pyruvate formate lyase-activating enzyme 1  25.55 
 
 
246 aa  103  3e-21  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.542279 
 
 
-
 
NC_009801  EcE24377A_0980  pyruvate formate lyase-activating enzyme 1  25.55 
 
 
265 aa  103  3e-21  Escherichia coli E24377A  Bacteria  normal  0.777271  n/a   
 
 
-
 
CP001509  ECD_00906  pyruvate formate lyase activating enzyme 1  25.55 
 
 
246 aa  103  4e-21  Escherichia coli BL21(DE3)  Bacteria  normal  0.84876  n/a   
 
 
-
 
CP001637  EcDH1_2741  pyruvate formate-lyase activating enzyme  25.55 
 
 
246 aa  103  4e-21  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2694  pyruvate formate lyase-activating enzyme 1  25.55 
 
 
246 aa  103  4e-21  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.489101 
 
 
-
 
NC_011353  ECH74115_1063  pyruvate formate lyase-activating enzyme 1  25.55 
 
 
246 aa  103  4e-21  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00913  hypothetical protein  25.55 
 
 
246 aa  103  4e-21  Escherichia coli BL21  Bacteria  normal  0.880778  n/a   
 
 
-
 
NC_009800  EcHS_A1008  pyruvate formate lyase-activating enzyme 1  25.55 
 
 
246 aa  103  4e-21  Escherichia coli HS  Bacteria  normal  0.312248  n/a   
 
 
-
 
NC_010658  SbBS512_E2426  pyruvate formate lyase-activating enzyme 1  25.55 
 
 
255 aa  103  4e-21  Shigella boydii CDC 3083-94  Bacteria  normal  0.0764987  n/a   
 
 
-
 
NC_011083  SeHA_C1068  pyruvate formate lyase-activating enzyme 1  25.91 
 
 
265 aa  102  6e-21  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.763935 
 
 
-
 
NC_010184  BcerKBAB4_0427  pyruvate formate-lyase activating enzyme  25.75 
 
 
243 aa  102  6e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0425  formate acetyltransferase activating enzyme (pyruvate formate-lyase activating enzyme)  25.75 
 
 
243 aa  102  6e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1034  pyruvate formate lyase-activating enzyme 1  25.91 
 
 
265 aa  102  6e-21  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.633483  normal  0.712061 
 
 
-
 
NC_011080  SNSL254_A1003  pyruvate formate lyase-activating enzyme 1  25.91 
 
 
265 aa  102  6e-21  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0975  pyruvate formate lyase-activating enzyme 1  25.91 
 
 
265 aa  102  6e-21  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.462536  n/a   
 
 
-
 
NC_011094  SeSA_A1083  pyruvate formate lyase-activating enzyme 1  25.91 
 
 
265 aa  102  6e-21  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.704189  normal 
 
 
-
 
NC_009457  VC0395_A1460  pyruvate formate lyase-activating enzyme 1  26.27 
 
 
246 aa  102  8e-21  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0491  pyruvate formate-lyase-activating enzyme  26.12 
 
 
243 aa  102  9e-21  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
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