Gene EcHS_A0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0882 
Symbol 
ID5594762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp890494 
End bp891393 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content54% 
IMG OID640920054 
Productglycyl-radical activating family protein 
Protein accessionYP_001457621 
Protein GI157160303 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02494] glycyl-radical enzyme activating protein family 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTCA ATATTCAGCG CTACTCGACC CATGATGGCC CCGGTATCCG CACGGTCGTA 
TTTCTTAAAG GCTGTTCGCT GGGCTGCCGC TGGTGTCAGA ACCCGGAAAG CCGCGCCCGC
ACGCAGGATC TGCTGTATGA CGCACGACTG TGTCTGGAAG GCTGCGAGCT GTGCGCTAAG
GCCGCGCCGG AAGTGATTGA GCGCGCGCTG AATGGTTTGC TTATTCATCG GGAAAAGTTA
ACCCCGGAGC ATCTGACGGC GTTAACCGAC TGCTGTCCGA CACAGGCGTT AACCGTGTGT
GGTGAAGTGA AAAGCGTTGA GGAGATCATG GCGACCGTTT TGCGCGATAA ACCGTTTTAC
GATCGCAGCG GCGGCGGCTT AACGCTTTCG GGTGGTGAAC CCTTTATGCA GCCGGAGATG
GCGACGGCGC TACTGCAAGC CAGCCACGAG GCAGGCATTC ATACTGCAGT AGAAACCTGT
CTGCATGTGC CGTGGAAATA TATCGCCCCT TCTCTGCCCT ATATCGATCT GTTTCTTGCC
GATTTAAAAC ACGTTGCCGA CGCGCCGTTT AAACAGTGGA CCGACGGTAA CGCCGCCAGA
GTGCTGGATA ACCTGAAAAA ACTCGCCGCA GCGGGCAAAA AAATCATTAT CCGCGTGCCG
CTGATTCAGG GCTTTAATGC CGACGAAACC TCTGTAAAAG CCATTACCGA TTTTGCCGCC
GACGAGCTGC ACGTTGGCGA AATTCATTTC CTGCCCTACC ACACGCTGGG CATCAACAAA
TATCACTTAC TTAATCTGCC CTATGACGCC CCGGAAAAAC CGCTTGATGC GCCAGAACTG
CTCGATTTTG CCCAGCAGTA TGCCTGCCAG AAAGGGTTAA CCGCGACCTT ACGAGGATAA
 
Protein sequence
MIFNIQRYST HDGPGIRTVV FLKGCSLGCR WCQNPESRAR TQDLLYDARL CLEGCELCAK 
AAPEVIERAL NGLLIHREKL TPEHLTALTD CCPTQALTVC GEVKSVEEIM ATVLRDKPFY
DRSGGGLTLS GGEPFMQPEM ATALLQASHE AGIHTAVETC LHVPWKYIAP SLPYIDLFLA
DLKHVADAPF KQWTDGNAAR VLDNLKKLAA AGKKIIIRVP LIQGFNADET SVKAITDFAA
DELHVGEIHF LPYHTLGINK YHLLNLPYDA PEKPLDAPEL LDFAQQYACQ KGLTATLRG