Gene SeD_A0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0945 
Symbol 
ID6871572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp937904 
End bp938803 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content56% 
IMG OID642784134 
Productglycyl-radical enzyme activating protein 
Protein accessionYP_002214809 
Protein GI198241822 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02494] glycyl-radical enzyme activating protein family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCA ATATTCAGCG CTATTCTACC CACGATGGCC CCGGTATCCG TACCGTAGTA 
TTTCTCAAAG GCTGTTCGTT GGGCTGTCGC TGGTGCCAGA ACCCGGAAAG CCGCGCCCGC
GCTCAGGATC TGTTATACGA CGCGCGGCTG TGTCTCGAAG GATGCGACCT GTGCGCGCAA
GCCGCGCCGG ACGTCATTGA GCGCGCGCTA AACGGCCTGC TCATCCATCG CGAGAAACTG
ACCGACGCCC ATTTTTCAGT CCTGGCGCAT TGCTGCCCCA CACAGGCGTT AACCGTGTGC
GGCGAAATAA AAAGCGTGGA TGAGATCATG GCGACGGTAC TGCGCGATAA ACCTTTTTAC
GATCGCAGCG GCGGCGGTCT GACGCTTTCC GGCGGCGAAC CGTTTATGCA GCCGGAGCTG
GCGGCAGAGC TGTTTAAAGC CAGCCATGAC GCCGGTATTC ATACGGCGGT TGAGACCTGT
CTGCATGTTC CATGGAAATA CATTGCGCCC TCACTGCCTT ATATCGATCT GTTTCTGGCT
GATTTGAAAC ATGTCGCCGA CGGGCCGTTT AAGCAGTGGA CCGATGGCAG CGCCTCGCGG
GTGTTGGAAA ATCTCAGGAA ACTCGCCGCC GCGGGCAAAA AAATGGTGAT TCGCGTCCCG
CTGATTCAGG GATTTAATGC CGATGAGGAG GCCATTAAAG CCATTACCGA CTTTGCCGCC
GACGAACTGC ACGTCGGGGA AATTCATTTT CTGCCCTACC ACACGCTGGG CATTAATAAA
TACCACTTAC TCAGTCAGCC CTATCATGCC CCGGATAAAC CACTGGATGC GCCGGCGTTA
CTTGATTTTG CCCAGAAGTA CGCCTGCCAA AAAGGTTTAA CCGCGACCCT ACGAGGATAA
 
Protein sequence
MIFNIQRYST HDGPGIRTVV FLKGCSLGCR WCQNPESRAR AQDLLYDARL CLEGCDLCAQ 
AAPDVIERAL NGLLIHREKL TDAHFSVLAH CCPTQALTVC GEIKSVDEIM ATVLRDKPFY
DRSGGGLTLS GGEPFMQPEL AAELFKASHD AGIHTAVETC LHVPWKYIAP SLPYIDLFLA
DLKHVADGPF KQWTDGSASR VLENLRKLAA AGKKMVIRVP LIQGFNADEE AIKAITDFAA
DELHVGEIHF LPYHTLGINK YHLLSQPYHA PDKPLDAPAL LDFAQKYACQ KGLTATLRG