| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1707 |
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| Symbol | pflA |
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| ID | 5610341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2045811 |
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| End bp | 2046551 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932577 |
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| Product | pyruvate formate lyase-activating enzyme 1 |
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| Protein accession | YP_001473446 |
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| Protein GI | 157374846 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0231805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGTAA AAGGTCGGAT CCACTCTCTG GAATCCTTTG GTACCGTAGA TGGTCCAGGC
ATAAGGTTTA TCACTTTTAT GCAGGGATGT TTGATGCGTT GTCAGTACTG TCACAATAGA
GATACATGGG ACCTTCACGG TGGCCGTGAA ATTGAAGTAG ATGAGTTGAT GACACAGATT
ATCAGCTATC GACCATTTCT CGAAGCCAGT GGTGGCGGCG TCACAGCCAG TGGCGGTGAA
GCCATACTGC AAGCTGAATT TGTCTCCGCT CTTTTTAAAG CCTGTAAGAA AGAGGGTATC
CATACCTGTC TCGATACTAA CGGCTTTGTC AGAAAGCATA CCCCAGTAAT CGATGAACTT
CTCGATAACA CAGATCTTGT GTTACTCGAC ATCAAACATA TTGACGATAA AAGACATATC
GACCTTACTA AGGTCAGCAA TCACCGCACT CTGCAATTCG CAGAATATCT AAGTAAACGA
CAACAAAAAA CTTGGGTGCG TTATGTCGTT GTTGGCGGCT TTACCGATGA TATTCCATCG
GCAAAAAGGT TAGCCGAGTT TATCAAGCCG ATGAAAAACG TTGAAAAAGT AGAGCTTCTA
CCCTACCACG AACTCGGAAA ACACAAATGG GAAGCTATGG GTGAAGAGTA TGAGCTTAAC
AACATATCTC CTCCCAGCAG TGAAACGATG GAACAGATTA AACAAGTATT TATCGATGCA
GGCATCAACG CCATTTACTA A
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| Protein sequence | MTVKGRIHSL ESFGTVDGPG IRFITFMQGC LMRCQYCHNR DTWDLHGGRE IEVDELMTQI
ISYRPFLEAS GGGVTASGGE AILQAEFVSA LFKACKKEGI HTCLDTNGFV RKHTPVIDEL
LDNTDLVLLD IKHIDDKRHI DLTKVSNHRT LQFAEYLSKR QQKTWVRYVV VGGFTDDIPS
AKRLAEFIKP MKNVEKVELL PYHELGKHKW EAMGEEYELN NISPPSSETM EQIKQVFIDA
GINAIY
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