Gene Sfri_2474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2474 
SymbolpflA 
ID4279385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2953792 
End bp2954529 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content43% 
IMG OID638135270 
Productpyruvate formate lyase-activating enzyme 1 
Protein accessionYP_751157 
Protein GI114563644 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02493] pyruvate formate-lyase 1-activating enzyme 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTAG GTCGCATACA TTCAGTGGAA TCATTCGGAA CCGTTGACGG TCCAGGAATT 
CGCTACATCG CTTTTATGCA AGGCTGTCTT ATGCGCTGCC AATATTGTCA TAATCGTGAT
ACATGGGATC TAGATGGCGG CAAGGAAGTT TCTGTTGATG AAATAATGAG CCAAGTCATT
TCTTATCAAC CCTTTTTAGA AGCCAGCGGT GGTGGTATTA CAGCCAGTGG TGGTGAAGCA
ATTTTACAAG CTCAATTTGT CAGCGAGTTG TTTAAAGCCT GCAAAAGCCA GGGGGTACAC
ACCTGTTTAG ACACCAACGG TTTTGTGCGT AAATACGAAC CGGTGATAGA TGAATTGCTC
GACAATACCG ACTTAGTGTT ACTTGATATC AAACAAATGG ACGATGCCAA GCACATCGAA
CTGACGAAAG TCAGCAACCA TCGAACACTA CAATTTGCAC AATATCTTGC CACACGAAAT
ATAAAAACCT GGATCCGTTA TGTGGTTGTC GCAGGATTTA CTGAAGATGT CGAATCAGCC
ATCGCACTCG CTGAGTTCAT TAAACCGATG AGCAATGTTG AAAAAGTTGA ATTACTGCCT
TATCACCCGT TAGGGGAACA TAAATGGCAA GCTTTTGGCG AAACGTATAC TTTGGCGGAT
ATTTCACCGC CAAGTACAGA GATTATGCAG AGAATTCAGC AAGTGTTTGT CGACCGAGGT
ATTAACGCTA CATTTTAG
 
Protein sequence
MTLGRIHSVE SFGTVDGPGI RYIAFMQGCL MRCQYCHNRD TWDLDGGKEV SVDEIMSQVI 
SYQPFLEASG GGITASGGEA ILQAQFVSEL FKACKSQGVH TCLDTNGFVR KYEPVIDELL
DNTDLVLLDI KQMDDAKHIE LTKVSNHRTL QFAQYLATRN IKTWIRYVVV AGFTEDVESA
IALAEFIKPM SNVEKVELLP YHPLGEHKWQ AFGETYTLAD ISPPSTEIMQ RIQQVFVDRG
INATF