Gene Cthe_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0506 
Symbol 
ID4808306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp618492 
End bp619208 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content45% 
IMG OID640105919 
Productpyruvate formate-lyase activating enzyme 
Protein accessionYP_001036936 
Protein GI125973026 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02493] pyruvate formate-lyase 1-activating enzyme 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0339577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAA AGGGCAGGAT ACACTCATTT GAATCTTTTG GGACACTGGA CGGACCGGGT 
ATAAGATTTG TGGTTTTCAT GCAGGGCTGT CCCTTGCGTT GTATATATTG CCACAACAGG
GATACCTGGG ATGTTAATGC GGGGAGTGAG TACACTCCCC GGCAAGTAAT TGATGAAATG
ATGAAATACA TAGACTATAT AAAGGTCTCC GGAGGCGGAA TAACTGTTAC CGGCGGGGAG
CCTGTTCTCC AGGCCGATTT TGTGGCCGAG GTGTTCAGAC TTGCAAAAGA GCAGGGAGTG
CATACGGCGC TGGATACCAA TGGATTTGCT GACATAGAGA AGGTTGAAAG GCTTATAAAA
TACACCGATC TTGTATTGCT GGATATAAAG CATGCCCGGG AGGATAAACA TAAGATAATT
ACCGGTGTGT CCAACGAAAA AATCAAGCGT TTTGCGCTGT ATCTTTCGGA CCAGGGAGTG
CCTATCTGGA TAAGATATGT CCTTGTCCCC GGATATACCG ACGATGAAGA TGACCTTAAA
ATGGCGGCTG ATTTCATAAA AAAGCTTAAA ACGGTGGAAA AAATCGAAGT TCTTCCTTAT
CACAACATGG GAGCATACAA ATGGGAAAAA CTTGGTCAGA AATACATGCT TGAAGGAGTA
AAGGGGCCGA GTGCGCAAGA GGTGGAAAAA GCAAAGAGGA TTCTGTCAGG CAAATAA
 
Protein sequence
MTLKGRIHSF ESFGTLDGPG IRFVVFMQGC PLRCIYCHNR DTWDVNAGSE YTPRQVIDEM 
MKYIDYIKVS GGGITVTGGE PVLQADFVAE VFRLAKEQGV HTALDTNGFA DIEKVERLIK
YTDLVLLDIK HAREDKHKII TGVSNEKIKR FALYLSDQGV PIWIRYVLVP GYTDDEDDLK
MAADFIKKLK TVEKIEVLPY HNMGAYKWEK LGQKYMLEGV KGPSAQEVEK AKRILSGK