| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1003 |
|---|
| Symbol | pflA |
|---|
| ID | 6485938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 1013167 |
|---|
| End bp | 1013964 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642736409 |
|---|
| Product | pyruvate formate lyase-activating enzyme 1 |
|---|
| Protein accession | YP_002040168 |
|---|
| Protein GI | 194446466 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACT TAACCGATTG TATTACAAAT GAAAGTGTTG CAGTAACTGC TGATAAAAAG
CCGGTTATTG GTCGCATTCA CTCCTTTGAG TCCTGTGGCA CCGTTGATGG CCCAGGCATC
CGCTTTATTA CCTTTTTTCA GGGCTGCCTG ATGCGCTGCC TGTATTGCCA TAACCGCGAC
ACATGGGATA CGCATGGCGG TAAAGAAATC ACCGTTGAAG ACTTAATGAA AGAGGTGGTG
ACCTATCGGC ATTTTATGAA TGCTTCTGGC GGCGGCGTGA CGGCATCCGG CGGCGAGGCC
ATTTTGCAGG CAGAATTTGT ACGCGACTGG TTTCGCGCCT GTAAAAAAGA AGGTATCCAC
ACCTGTCTCG ACACCAACGG CTTTGTGCGC CGTTATGACC CGGTGATTGA TGAACTGTTG
GACGTTACCG ATCTGGTGAT GCTCGATCTC AAGCAGATGA ATGATGAGAT CCACCAGAAT
CTGGTCGGTG TCTCCAATCA CCGGACGCTG GAATTCGCGC AGTATTTATC AAAGAAAAAT
GTGAAGGTCT GGATCCGTTA CGTTGTCGTT CCCGGCTGGT CTGACGACGA TGATTCCGCG
CATCGCCTGG GCGAGTTTAC CCGCGATATG GGTAATGTCG AAAAAATCGA ACTGCTGCCC
TATCATGAGC TGGGCAAACA TAAATGGGTG GCAATGGGCG AAGAATATAA ACTGGATGGC
GTGAAGCCGC CTAAAAAAGA GACCATGGAA CGTGTAAAGG GTATTCTTGA GCAGTATGGT
CATAAAGTGA TGTATTAA
|
|---|
| Protein sequence | MSNLTDCITN ESVAVTADKK PVIGRIHSFE SCGTVDGPGI RFITFFQGCL MRCLYCHNRD
TWDTHGGKEI TVEDLMKEVV TYRHFMNASG GGVTASGGEA ILQAEFVRDW FRACKKEGIH
TCLDTNGFVR RYDPVIDELL DVTDLVMLDL KQMNDEIHQN LVGVSNHRTL EFAQYLSKKN
VKVWIRYVVV PGWSDDDDSA HRLGEFTRDM GNVEKIELLP YHELGKHKWV AMGEEYKLDG
VKPPKKETME RVKGILEQYG HKVMY
|
|---|
| |