Gene Shel_17450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17450 
Symbol 
ID8395635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1973680 
End bp1974615 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content61% 
IMG OID644986499 
Productglycyl-radical enzyme activator family protein 
Protein accessionYP_003144113 
Protein GI257064441 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02494] glycyl-radical enzyme activating protein family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.478583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA ACGCCGACAG CACACTGGTG GGAAGCATCC AGAAGTTCTC GATCGAGGAC 
GGCCCGGGTA TACGGACGAC CGTGTTCCTG AAGGGCTGCC CTCTGCGTTG CGCATGGTGC
CACAACCCCG AGCTCATCAG CTTCGAGCAG CAGCTCATCC AGTCGCCGAA CAACTGCATA
GGCTGCGGCG AGTGCGTGAA CGTGTGCCCT GTCGGAGCAA TCCGCATGGA TTCTGACGAA
GGCGTCGTCA TCGACAGGGC TTCGTGCACG CTGTGTTTGG CCTGTGCCGA CCAGTGCTAC
GCCAAGGCGC TTCGTGCCGT TGCCAAACCC ATGACGATCG ACGAGATCCT GGCCGACGCC
GAGCAGGACA AGGAGTTCTA CGACAACACC GGCGGCGGCA TCACCATCAG CGGCGGAGAG
ATGCTGACGC ACGCCGCGTT CGTGGGCGAG CTCATAGACG AGGCTGCACG CCGCGGCATC
AGCACATGCA TCGATACCAC AGGCTACGGC GATGCCGAGG CGCTTCTGGA CCTGGCGTCC
AAAGACAGCG TCACCACGGT GCTCTACGAC CTGAAATCCA TCGACGACGA GGTCCACCGC
GAGTACACGG GCGTTGGAAA CGAAACGATC CTGGCCAACC TGAGGCTTCT GGCAGCCGAC
GAACGCACGC GAAGCAAGAT CGTCATGCGC ATGCCGCTCA TCAAAGGCGT CAACGACGAC
GAAGACATGA TCGAGCGCAC TGCCGAGCTG TACAGGGAAT TGGGAATCAC CCAGGTGAAC
CTGCTGCCCT ACCACAATCT GGGGGTCGGC AAAGCCAGAA ACGTCGGCCG GAGCCAGCGG
GAGTTCGAGG CCCCGGACGA GAAGCGCATG GCAGCCATTG CCGAGCGCCT GCAACACGTT
GACAACCTAG AGGTCGGAAT TCTAGGGAAG TTATAA
 
Protein sequence
MTRNADSTLV GSIQKFSIED GPGIRTTVFL KGCPLRCAWC HNPELISFEQ QLIQSPNNCI 
GCGECVNVCP VGAIRMDSDE GVVIDRASCT LCLACADQCY AKALRAVAKP MTIDEILADA
EQDKEFYDNT GGGITISGGE MLTHAAFVGE LIDEAARRGI STCIDTTGYG DAEALLDLAS
KDSVTTVLYD LKSIDDEVHR EYTGVGNETI LANLRLLAAD ERTRSKIVMR MPLIKGVNDD
EDMIERTAEL YRELGITQVN LLPYHNLGVG KARNVGRSQR EFEAPDEKRM AAIAERLQHV
DNLEVGILGK L