Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4446 |
Symbol | |
ID | 6483686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4322704 |
End bp | 4323582 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739685 |
Product | pyruvate formate lyase II activase |
Protein accession | YP_002043379 |
Protein GI | 194443202 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | [TIGR02494] glycyl-radical enzyme activating protein family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 0.193926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTAT TCGCCGCACC GCGCATCAGT TGTGAGGTTG TGGGGGCGCG CGATGAGGAG ACCGCGCGTA TCTTCAATAT CCAGCGCTAT TCGCTGAATG ACGGGCAGGG GATTCGTACG GTGGTCTTTT TTAAGGGCTG TCCGCATACC TGTCCGTGGT GCGCTAATCC GGAATCTATC TCGCCGCGCA TTGAAACGGT GCGCCGGGAA AATAAATGCC TGCGTTGCAC GCCGTGTCTG CGGGATGCCG ACGAATGTCC TTCCGGCGCG TTTGAGCGTA TTGGGCGTGA TATTACGCTG GATGAACTGG AACGCGAAGT GCTGAAAGAC GACATCTTCT TTCGTACTTC CGGCGGCGGG GTGACGCTTT CTGGCGGCGA AGTGCTGATG CAGGCGCCGT TCGCCACGCG CTTCTTACAG CGATTGCGGC GTTGGGGCGT TCCTTGTGCT ATTGAAACGG CTGGCGATAC GTCGGCCAGC CGTCTACTGC CGTTGGCAAG GGCGTGTGAT GAGGTATTGT TTGATCTGAA AATTATGGAT GCGGAGCGGG CGCGCGAGGT GATCAACATG AATCTGCCGC GCGTACTGGA GAATTTACGG TTACTGGTTA GCGAGGGAAT CACGGTGATC CCTCGTTTGC CGTTGATTCC TGGCTTTACG CTTAACGCAG AGAATCTGCA GTGCGCGTTA ACATTGTTGA GATCATTAGG AATAAAGCAG GTTCACCTGC TACCGTTTCA TCAGTACGGC GAGCCGAAAT ACCGGCTGCT TGGAAAATCA TGGATGATGA AAGATATTTC CGCGCCGTCG GTGCAAGAGA TCGCTCTGTT TCGGGAGATG GCGGAGCAAG CAGGATTTCA GGTCACCACA GGAGGTTAA
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Protein sequence | MTLFAAPRIS CEVVGARDEE TARIFNIQRY SLNDGQGIRT VVFFKGCPHT CPWCANPESI SPRIETVRRE NKCLRCTPCL RDADECPSGA FERIGRDITL DELEREVLKD DIFFRTSGGG VTLSGGEVLM QAPFATRFLQ RLRRWGVPCA IETAGDTSAS RLLPLARACD EVLFDLKIMD AERAREVINM NLPRVLENLR LLVSEGITVI PRLPLIPGFT LNAENLQCAL TLLRSLGIKQ VHLLPFHQYG EPKYRLLGKS WMMKDISAPS VQEIALFREM AEQAGFQVTT GG
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