| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1460 |
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| Symbol | pflA |
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| ID | 5137666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1565727 |
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| End bp | 1566467 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640532918 |
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| Product | pyruvate formate lyase-activating enzyme 1 |
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| Protein accession | YP_001217403 |
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| Protein GI | 147674120 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTACCA TTGGTCGAAT TCACTCTTTC GAATCTTGTG GCACTGTTGA TGGCCCAGGA
ATCCGCTTTA TTGTCTTCCT GCAAGGGTGC CTGTTTCGCT GCAAGTATTG TCATAACCGA
GACACTTGGG ATACCCATAC GGGTCGTGAA GTCACGGTTG AGGAAATCAT CAAAGAAGCG
AAATCTTATC GCCATTTTAT GAACGCTTCT GGTGGCGGCA TCACCTGCTC TGGTGGGGAA
GCCATGCTGC AACCCGAATT TGTGCGTGAC TTTTTCCGCG CAGCGAAAGC CGAAGGTATT
CATACCTGTT TAGACACCAA TGGCTACGTG CGTAAATTCA CACCTGTGAT TGACGAAGTG
TTGGAAGTGA CTGATTTGGT GATGCTCGAT ATCAAACAGA TGGATGATGA GATCCACCAA
GATTTGATTG GCGTGTCTAA CAAACGCACC TTAGATTTTG CGCGCTACCT GCATCAAATT
GGTCAAAAAA CTTGGTTGCG TTACGTGGTG GTTCCAGGTT ACACCGATGA TGAAGCATCT
GCTCATCAAC TGGGTGAGTT TATTAAAGAC ATGGAAAACA TCGAGAAAAT TGAGCTGCTG
CCTTACCACA AACTTGGCGC ACACAAATGG GAAGCCATGG GCGAAGAATA TCCACTGGAA
GGCGTGAATC CGCCAAGCAA AGAAACCATG GATAAAATCG TAGCGATCCT TGAGCAGTAT
CACTCAAACG TAAAATATTG A
|
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| Protein sequence | MSTIGRIHSF ESCGTVDGPG IRFIVFLQGC LFRCKYCHNR DTWDTHTGRE VTVEEIIKEA
KSYRHFMNAS GGGITCSGGE AMLQPEFVRD FFRAAKAEGI HTCLDTNGYV RKFTPVIDEV
LEVTDLVMLD IKQMDDEIHQ DLIGVSNKRT LDFARYLHQI GQKTWLRYVV VPGYTDDEAS
AHQLGEFIKD MENIEKIELL PYHKLGAHKW EAMGEEYPLE GVNPPSKETM DKIVAILEQY
HSNVKY
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