Gene Sked_16340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_16340 
Symbol 
ID8633270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1834083 
End bp1834946 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content69% 
IMG OID 
Productpyruvate formate-lyase 1-activating enzyme 
Protein accessionYP_003314403 
Protein GI269794948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.243728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTC AGAGCACCGC CTCCACCTTC GACAAGGACT TCGAGGCCCC CGAGCACCGC 
ACGGTGGGCG CGGGTACCGA GGGGCTCGAG GTGTCGGACG CGAGCCGCGG CGACAGGCTC
GCCCAGATGC GCGCCGGGAC CCTCGGCTCC ATCCACTCCT GGGAGCTGGT CACCGCGGTC
GACGGGCCCG GGACACGGAT GACGGTGTTC TTCGCCGGCT GCCCGCTGCG CTGCCTCTAC
TGCCACAACC CCGACACCAT GAAGATGAAG GACGGCGAGT CGGTCACCTC CGACGAGCTG
CTGCGTCGCA TCCGTCGCTA CAAGGCCGTC TTCCGCTCGA CGGGTGGCGG ACTCACGATC
TCGGGCGGCG AGGTGCTCAT GCAGCCCGCC TTCGCCGCGA CCATCCTCGC CGGGGCCAAG
GCCGAGGGCA TCCACACCAC GATCGACACC TCCGGGTACC TCGGCGCGTC GTGCACCGAC
GAGATGCTCG AGGACGTCGA CCTCGTGCTC CTCGACGTGA AGTCGGGCGA CGAGGCGACC
TACACCAAGG TCACCGGGCG CGAGCTCCAG CCCACCCTCG ACTTCGGTCG CCGGCTCGCC
GACAAGGGGA TCGAGATCTG GCTCCGGTTC GTGCTCGTCC CAGGCCTCAC CGACGACGTC
GCGAACGTCG AGTCGGTCGC CGAGTACGCC GCGACCCTGT CCTCCGTGTC CCGGGTCGAG
GTGCTGCCCT TCCACCAGAT GGGCCAGGAC AAGTGGAAGG CCCTCGGCAT GACCTACGAG
CTCGGCGACG TCGAGCCGCC GACCACCGAG CTCCTCGATC GGGTGCGCGA GCAGTTCCGC
AGCAAGGGGC TCAAGGTCTA CTGA
 
Protein sequence
MSAQSTASTF DKDFEAPEHR TVGAGTEGLE VSDASRGDRL AQMRAGTLGS IHSWELVTAV 
DGPGTRMTVF FAGCPLRCLY CHNPDTMKMK DGESVTSDEL LRRIRRYKAV FRSTGGGLTI
SGGEVLMQPA FAATILAGAK AEGIHTTIDT SGYLGASCTD EMLEDVDLVL LDVKSGDEAT
YTKVTGRELQ PTLDFGRRLA DKGIEIWLRF VLVPGLTDDV ANVESVAEYA ATLSSVSRVE
VLPFHQMGQD KWKALGMTYE LGDVEPPTTE LLDRVREQFR SKGLKVY