Gene EcolC_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2820 
Symbol 
ID6065067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3083520 
End bp3084419 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content54% 
IMG OID641602226 
Productglycyl-radical activating family protein 
Protein accessionYP_001725775 
Protein GI170020821 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02494] glycyl-radical enzyme activating protein family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCA ATATTCAGCG CTACTCGACC CATGATGGCC CCGGTATCCG CACGGTCGTA 
TTTCTTAAAG GCTGTTCGCT GGGCTGCCGC TGGTGTCAGA ATCCGGAAAG CCGCGCCCGC
ACGCAGGATC TGCTGTATGA CGCACGACTG TGTCTGGAAG GCTGCGAGCT GTGCGCTAAG
GCCGCGCCGG AAGTGATTGA GCGCGCGCTG AATGGTTTGC TTATTCATCG GGAAAAGTTA
ACCCCGGAGC ATCTGACGGC GTTAACCGAC TGCTGTCCGA CACAGGCGTT AACCGTGTGT
GGTGAAGTGA AAAGCGTTGA GGAGATCATG GCGACCGTTT TGCGCGATAA ACCGTTTTAC
GATCGCAGCG GCGGCGGCTT AACGCTTTCG GGTGGTGAAC CCTTTATGCA GCCGGAGATG
GCGACGGCGC TACTGCAAGC CAGCCACGAG GCAGGCATTC ATACTGCAGT AGAAACCTGT
CTGCATGTGC CGTGGAAATA TATCGCCCCT TCTCTGCCCT ATATCGATCT GTTTCTTGCC
GATTTAAAAC ACGTTGCCGA CGCGCCGTTT AAACAGTGGA CCGACGGTAA CGCCGCCAGA
GTGCTGGATA ACCTGAAAAA ACTCGCCGCA GCGGGCAAAA AAATCATTAT CCGCGTGCCG
CTGATTCAGG GCTTTAATGC CGACGAAACC TCTGTAAAAG CCATTACCGA TTTTGCCGCC
GACGAGCTGC ACGTTGGCGA AATTCATTTC CTGCCCTACC ACACGCTGGG CATCAACAAA
TATCACTTAC TTAATCTGCC CTATGACGCC CCGGAAAAAC CGCTTGATGC GCCAGAACTG
CTCGATTTTG CCCAGCAGTA TGCCTGCCAG AAAGGGTTAA CCGCGACCTT ACGAGGATAA
 
Protein sequence
MIFNIQRYST HDGPGIRTVV FLKGCSLGCR WCQNPESRAR TQDLLYDARL CLEGCELCAK 
AAPEVIERAL NGLLIHREKL TPEHLTALTD CCPTQALTVC GEVKSVEEIM ATVLRDKPFY
DRSGGGLTLS GGEPFMQPEM ATALLQASHE AGIHTAVETC LHVPWKYIAP SLPYIDLFLA
DLKHVADAPF KQWTDGNAAR VLDNLKKLAA AGKKIIIRVP LIQGFNADET SVKAITDFAA
DELHVGEIHF LPYHTLGINK YHLLNLPYDA PEKPLDAPEL LDFAQQYACQ KGLTATLRG