Gene Cphy_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_2820 
Symbol 
ID5742136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3441936 
End bp3442688 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content35% 
IMG OID641293912 
Productpyruvate formate-lyase activating enzyme 
Protein accessionYP_001559919 
Protein GI160880951 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02493] pyruvate formate-lyase 1-activating enzyme 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000272816 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGGAA AAGTTCATTC AACAGAATCA TTTGGAACAG TAGATGGACC TGGTATCCGC 
TTTGTCGTAT TTTTACAAGG ATGTCCTATG AGATGCCAGT ACTGCCATAA CCCAGATACT
TGGGAGTTAA ATGGAGGAAC GCTTCGCTCG GTTGAAGATA TTCTAAAAGA ATATGATTCC
TATAAGGAAT TTTTAAAAGG CGGAGGAATT ACAGTAACAG GTGGAGAGCC TTTACTCCAG
CTTGAATTTG TTACAGAATT ATTTGAAGAA GCGAAGAAAA AAGGGATTCA TACCTGCATT
GATACGTCAG GGATAACATT TCGACCAGCT GATAAAGAAA AATACTTACC TTTGTTAAAG
GTAACAGACT TAGTTATGTT AGATATAAAG CAGATGAATG CAATAAAGCA TAAAGAATTA
ACTGGACATG ATAATGCAAA CATCTTAGAA TTTGCAAGAT TTCTGTCCAA TCAGAAGGTT
ACACTCTGGA TACGATTTGT TGCAGTACCT GGAATAACTG ATGATTCTAA AGAATTGGTA
CAACTTGGAG AGTTTTTAGC AGAATTGACA TCCTTAAAAG CTTTAGATGT ACTTCCTTAT
CATTCTATGG GAAAAAGTAA ATATGAAGCA ATGAACATGA AATATCCATT AGAGGGAATA
CCGGATATGG ATGTTGATGA TGCGGTTAAT ATTAGAAATA TTATTCTTAA GGCACGGAAG
GAAGTAATCA ATAAGCGGAA ATCTACCTTT TAA
 
Protein sequence
MLGKVHSTES FGTVDGPGIR FVVFLQGCPM RCQYCHNPDT WELNGGTLRS VEDILKEYDS 
YKEFLKGGGI TVTGGEPLLQ LEFVTELFEE AKKKGIHTCI DTSGITFRPA DKEKYLPLLK
VTDLVMLDIK QMNAIKHKEL TGHDNANILE FARFLSNQKV TLWIRFVAVP GITDDSKELV
QLGEFLAELT SLKALDVLPY HSMGKSKYEA MNMKYPLEGI PDMDVDDAVN IRNIILKARK
EVINKRKSTF