Gene Dred_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2966 
Symbol 
ID4956429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3221324 
End bp3222217 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content48% 
IMG OID640182154 
Productglycyl-radical activating family protein 
Protein accessionYP_001114294 
Protein GI134300798 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02494] glycyl-radical enzyme activating protein family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCACGG GTAGCATCTT TGATATCATG AAATACTCCA TTCGGGATGG CCCGGGTATT 
CGGACCACTA TCTTTTTTAA GGGCTGCCCC TTAAAATGCC TGTGGTGCCA CAATCCTGAG
AGTCAAGACC CAGAGCCGCA ATTAATGTTC TGGCCGGACC GTTGTATTGG CTGTGGCGAC
TGTGTGGAGA CTTGTGTCAA CCAGGCAATC CTACCCGGGG GAATCCATAA GGAAAGGTGT
CGGCGGTGTG GGCAATGTGC GGCGGTTTGT CCAACCCTGG CCCGGGAAAT GGTGGGGCGC
AGGGTTGCGG TGGAGGAAGT GGTAAGGGAG ATTGAAAGGG ATCGCATTTT TTATGAGGAG
TCCGGCGGTG GTGTAACCTT CTCCGGTGGC GAGCCCTTGG TCCAACCAAG TTTTCTCCAT
AGTTTGCTGG ATGCCTGCCA GGATAGAGAA ATTGCTACGG CGGTGGATAC CACCGGTTAC
ACTGCAGAGG AGACACTGCT TAGTATCTCT GAAAAGGTGG ATCTGTTCCT TTATGATATA
AAACTGATGG ATGATGAGAA ACACAAATTG TTCACCGGCG TATCCAACCG ACTGATATTA
AACAATTTAC AGAAGCTTTC CCAACGACAT CCCCATATTA TCATCCGTAT CCCGATAATT
CCGGGCATTA ACGATGATAG GGAAAACCTT GAACAAATGG CTAGTTTTAT TAGTACTTTA
CAAAATATTT GGGAGGTCCA ATTACTTCCT TACCATAACA CAGGTATGGG CAAATATGAA
AGATTGAATT TGCCCTACCA GTTGGCTCAA ACGCAACCTC CAGCAGACGA AGCCATGCAG
CTCTTAGCAG GGGAATTCAG AAGTTACGGA CTAAATGTGA AGATCGGAGG CTAA
 
Protein sequence
MLTGSIFDIM KYSIRDGPGI RTTIFFKGCP LKCLWCHNPE SQDPEPQLMF WPDRCIGCGD 
CVETCVNQAI LPGGIHKERC RRCGQCAAVC PTLAREMVGR RVAVEEVVRE IERDRIFYEE
SGGGVTFSGG EPLVQPSFLH SLLDACQDRE IATAVDTTGY TAEETLLSIS EKVDLFLYDI
KLMDDEKHKL FTGVSNRLIL NNLQKLSQRH PHIIIRIPII PGINDDRENL EQMASFISTL
QNIWEVQLLP YHNTGMGKYE RLNLPYQLAQ TQPPADEAMQ LLAGEFRSYG LNVKIGG