| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4438 |
|---|
| Symbol | |
|---|
| ID | 6272997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 4146850 |
|---|
| End bp | 4147728 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641728234 |
|---|
| Product | pyruvate formate lyase II activase |
|---|
| Protein accession | YP_001882647 |
|---|
| Protein GI | 187731448 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | [TIGR02494] glycyl-radical enzyme activating protein family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAT CCGCCGGACA GCGCATCAGC TGTAACGTTG TGGAAACGCG CCGCAATGAT
GTGGCGCGCA TTTTCAACAT TCAGCGTTAT TCACTGAATG ACGGCGAGGG CATTCGTACG
GTGGTCTTTT TTAAAGGCTG TCCGCATCTT TGCCCGTGGT GTGCTAATCC GGAGTCGATC
TCCGGCAAAA TCCAGACGGT ACGCAGAGAG GCGAAATGTC TGCACTGTGC GAAATGTTTG
CGTGATGCGG ATGAATGCCC CTCCGGGGCG TTTGAACGGA TTGGTCGCGA TATCAGCCTT
GACGCTCTGG AACGGGAAGT GATGAAAGAT GACATTTTTT TTCGCACGTC CGGCGGCGGC
GTCACGCTTT CTGGCGGCGA AGTGTTAATG CAGGCGGAGT TTGCTACCCG TTTTTTACAG
CGACTGCGGC TGTGGGGTGT CTCATGTGCC ATTGAAACTG CCGGAGACGC ACCAGTCAGC
AAGCTGTTAC CGCTGGCGAA ATTGTGCGAT GAAGTGTTGT TCGATTTAAA AATTATGGAC
GCGACTCAGG CGCGGGATGT GGTGAAGATG AACCTGCCAC GCGTACTGGA GAACCTGCGT
TTGCTGGTGA GTGAGGGTGT CAACGTGATC CCGCGTTTGC CGCTGATCCC CGGTTTCACA
CTCAGCCGGG AGAATATGCA GCAGGCGCTG GACGTGCTGA TCCCGCTGAA TATCAGGCAG
ATCCATCTGT TGCCGTTTCA TCAGTACGGC GAGCCGAAAT ACCGCCTGCT GGGGAAAACA
TGGTCGATGA AGGATGTTGC TGCGCCGTCA TCAGCCGATG TGGCAACGAT GCGCGAAATG
GCAGAACGGG CCGGATTTCA GGTTACCGTG GGAGGTTAA
|
|---|
| Protein sequence | MTSSAGQRIS CNVVETRRND VARIFNIQRY SLNDGEGIRT VVFFKGCPHL CPWCANPESI
SGKIQTVRRE AKCLHCAKCL RDADECPSGA FERIGRDISL DALEREVMKD DIFFRTSGGG
VTLSGGEVLM QAEFATRFLQ RLRLWGVSCA IETAGDAPVS KLLPLAKLCD EVLFDLKIMD
ATQARDVVKM NLPRVLENLR LLVSEGVNVI PRLPLIPGFT LSRENMQQAL DVLIPLNIRQ
IHLLPFHQYG EPKYRLLGKT WSMKDVAAPS SADVATMREM AERAGFQVTV GG
|
|---|
| |