Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0207 |
Symbol | |
ID | 5079084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 226933 |
End bp | 227853 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640497327 |
Product | glycyl-radical activating family protein |
Protein accession | YP_001181742 |
Protein GI | 146291318 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | [TIGR02494] glycyl-radical enzyme activating protein family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAAA TTGATTACGC GCAGACTGGC ACCGTATTTA ATATACAAAA ATTCTCCTTA CATGATGGCC CGGGAATACG CACCATTGTA TTCCTGAAAG GCTGTTATCT GGCATGTAAA TGGTGCAGTA ATCCGGAATC ACAGCACACT GAACCGGAAA TATTTTACTA CGATCGCAAT TGTATCCATT GCGGACGCTG CGTATCCGCC TGCCCCGTTG GGGCTATCGA TGCCTCACGT CAAGGGCTTA TTGACCGGAA TGCCTGTATT CATTGTGGAG CTTGCGCTGA GGTCTGCCCG GCTGGCGCGA TGGTTCAGTC AGGTAAGAGA ATGTCGGTGG TGGAGGTTAT AGACGAACTG CGTAAAGATG AGACGCATTA TCGCCGCTCC GGTGGAGGTA TTACATTGTC CGGTGGCGAA GCACTGGCTC AGCCTGCATT TGCAGCAGCA TTGCTGGCCG CCTGCAAAGC CAGAGGATGG CATACAGCGA TGGAAACCAC CGGAATAGCC TCCCGGGCCG TGCTGGAAAA GGTTATCCCA TTGCTTGATA TCGTATTGCT CGACATCAAA ACCTTTTATA GTGAACGGCA TAAGGAATTT ACGGGACATC CGAATGAGAC GGTTTTACGT AATGCACTGA CAATTTCAGA ACTGGCAAAG AATGTCGCCG TTCGGATCCC GGTAATTCCT GGATTTAATG ATGATGAACA AAGTATCGAA GCTATTGCCA GATTTGTTAC GCACATGAAA AATGTATCGC GATTACATTT ATTGCCCTAT CACAACTATG GCCAGAATAA ATATAACCTG CTTGGCAGAA CGTACGACAT GATTGAAATA AAACCACCGG AAGAAAGTCG TATGCATAAA TATAAAGATA TTGTGACATC CCTTGGAATC GACTGCGTCA TCGGTGGGTA A
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Protein sequence | MAEIDYAQTG TVFNIQKFSL HDGPGIRTIV FLKGCYLACK WCSNPESQHT EPEIFYYDRN CIHCGRCVSA CPVGAIDASR QGLIDRNACI HCGACAEVCP AGAMVQSGKR MSVVEVIDEL RKDETHYRRS GGGITLSGGE ALAQPAFAAA LLAACKARGW HTAMETTGIA SRAVLEKVIP LLDIVLLDIK TFYSERHKEF TGHPNETVLR NALTISELAK NVAVRIPVIP GFNDDEQSIE AIARFVTHMK NVSRLHLLPY HNYGQNKYNL LGRTYDMIEI KPPEESRMHK YKDIVTSLGI DCVIGG
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