More than 300 homologs were found in PanDaTox collection
for query gene Amir_1045 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_2580  acyl-CoA dehydrogenase domain protein  64.96 
 
 
571 aa  740    Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1045  acyl-CoA dehydrogenase domain protein  100 
 
 
587 aa  1197    Actinosynnema mirum DSM 43827  Bacteria  normal  0.972862  n/a   
 
 
-
 
NC_009338  Mflv_0398  acyl-CoA dehydrogenase domain-containing protein  66.78 
 
 
579 aa  796    Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.719718  normal  0.601672 
 
 
-
 
NC_009831  Ssed_3347  acyl-CoA dehydrogenase-like protein  54.99 
 
 
569 aa  641    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2118  acyl-CoA dehydrogenase domain protein  73.31 
 
 
577 aa  841    Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2682  acyl-CoA dehydrogenase domain protein  66.08 
 
 
572 aa  763    Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.638396  n/a   
 
 
-
 
NC_008726  Mvan_0281  acyl-CoA dehydrogenase domain-containing protein  64.86 
 
 
590 aa  780    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.619758  normal 
 
 
-
 
NC_009565  TBFG_10233  acyl-CoA dehydrogenase fadE4  54.29 
 
 
568 aa  619  1e-176  Mycobacterium tuberculosis F11  Bacteria  normal  0.267065  normal 
 
 
-
 
NC_007908  Rfer_0062  acyl-CoA dehydrogenase-like  54.31 
 
 
567 aa  617  1e-175  Rhodoferax ferrireducens T118  Bacteria  normal  0.541142  n/a   
 
 
-
 
NC_009943  Dole_3123  acyl-CoA dehydrogenase domain-containing protein  44.6 
 
 
568 aa  528  1e-148  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000772503  n/a   
 
 
-
 
NC_008148  Rxyl_2278  acyl-CoA dehydrogenase-like protein  26.25 
 
 
390 aa  104  6e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1713  acyl-CoA dehydrogenase domain-containing protein  25.08 
 
 
586 aa  100  1e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0276  acyl-CoA dehydrogenase domain-containing protein  25.08 
 
 
586 aa  99.8  1e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1301  acyl-CoA dehydrogenase domain-containing protein  25.08 
 
 
586 aa  99  2e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1017  acyl-CoA dehydrogenase domain-containing protein  25.08 
 
 
586 aa  99  2e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0431122  n/a   
 
 
-
 
NC_008835  BMA10229_0294  acyl-CoA dehydrogenase domain-containing protein  25.08 
 
 
586 aa  99  2e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0434167  n/a   
 
 
-
 
NC_009075  BURPS668_A1799  Acyl-CoA dehydrogenases  25.08 
 
 
586 aa  99  2e-19  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0496  acyl-CoA dehydrogenase domain-containing protein  25.07 
 
 
411 aa  94  7e-18  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.249312  normal 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  24.15 
 
 
402 aa  92.4  2e-17  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_006368  lpp2177  hypothetical protein  24.31 
 
 
563 aa  91.7  4e-17  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2151  hypothetical protein  24.31 
 
 
563 aa  91.7  4e-17  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009376  Pars_0407  acyl-CoA dehydrogenase domain-containing protein  26.67 
 
 
378 aa  91.7  4e-17  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  25.17 
 
 
379 aa  89.7  1e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007952  Bxe_B0278  putative acyl-CoA dehydrogenase  26.11 
 
 
402 aa  90.1  1e-16  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7164  acyl-CoA dehydrogenase domain protein  26.11 
 
 
402 aa  89.7  1e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  0.647387  normal 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  25.17 
 
 
379 aa  90.1  1e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3176  acyl-CoA dehydrogenase domain-containing protein  26.63 
 
 
389 aa  90.1  1e-16  Acidovorax citrulli AAC00-1  Bacteria  normal  0.05744  normal  0.678758 
 
 
-
 
NC_013440  Hoch_4885  Butyryl-CoA dehydrogenase  26.29 
 
 
413 aa  87  9e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0885912 
 
 
-
 
NC_003296  RS02011  acyl-CoA dehydrogenase oxidoreductase protein  25.45 
 
 
399 aa  87  9e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2037  acyl-CoA dehydrogenase domain-containing protein  25.6 
 
 
375 aa  85.9  0.000000000000002  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.666233 
 
 
-
 
NC_008781  Pnap_3620  acyl-CoA dehydrogenase domain-containing protein  24.85 
 
 
393 aa  85.5  0.000000000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.404533 
 
 
-
 
NC_007348  Reut_B4257  butyryl-CoA dehydrogenase  25 
 
 
377 aa  85.5  0.000000000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.725306  n/a   
 
 
-
 
NC_009485  BBta_7841  putative acyl-CoA dehydrogenase  25.33 
 
 
398 aa  84.7  0.000000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0226224  normal  0.324634 
 
 
-
 
NC_012791  Vapar_5041  acyl-CoA dehydrogenase domain protein  24.23 
 
 
397 aa  84.3  0.000000000000005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  23.47 
 
 
379 aa  82.8  0.00000000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  26.6 
 
 
386 aa  82  0.00000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_012034  Athe_1232  acyl-CoA dehydrogenase domain protein  23.83 
 
 
381 aa  80.9  0.00000000000006  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2115  acyl-CoA dehydrogenase domain-containing protein  23.33 
 
 
404 aa  80.5  0.00000000000007  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.874922 
 
 
-
 
NC_013093  Amir_1570  acyl-CoA dehydrogenase domain protein  25.09 
 
 
383 aa  79.7  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2181  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  23.75 
 
 
389 aa  80.1  0.0000000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.594963  n/a   
 
 
-
 
NC_011726  PCC8801_0028  acyl-CoA dehydrogenase domain protein  22.26 
 
 
603 aa  79.7  0.0000000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0026  acyl-CoA dehydrogenase domain protein  22.26 
 
 
603 aa  79.7  0.0000000000001  Cyanothece sp. PCC 8802  Bacteria  normal  0.0227659  normal 
 
 
-
 
NC_010623  Bphy_4072  acyl-CoA dehydrogenase domain-containing protein  23.71 
 
 
401 aa  79.7  0.0000000000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  22.87 
 
 
386 aa  79.3  0.0000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_010678  Rpic_3835  acyl-CoA dehydrogenase domain protein  24.16 
 
 
391 aa  79.3  0.0000000000002  Ralstonia pickettii 12J  Bacteria  normal  normal  0.588687 
 
 
-
 
NC_008554  Sfum_3291  acyl-CoA dehydrogenase domain-containing protein  25.44 
 
 
555 aa  79.3  0.0000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.729038  normal 
 
 
-
 
NC_012857  Rpic12D_3948  acyl-CoA dehydrogenase domain protein  24.16 
 
 
391 aa  79.3  0.0000000000002  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0664421 
 
 
-
 
NC_010002  Daci_4469  acyl-CoA dehydrogenase domain-containing protein  24.24 
 
 
389 aa  78.2  0.0000000000004  Delftia acidovorans SPH-1  Bacteria  normal  0.029664  normal  0.327843 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  23.37 
 
 
379 aa  77.8  0.0000000000005  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_008347  Mmar10_2691  acyl-CoA dehydrogenase domain-containing protein  23.9 
 
 
391 aa  77.8  0.0000000000005  Maricaulis maris MCS10  Bacteria  normal  0.602667  normal 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  25.93 
 
 
379 aa  77.4  0.0000000000006  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  27.81 
 
 
381 aa  77.8  0.0000000000006  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  23.59 
 
 
400 aa  77.4  0.0000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_009668  Oant_4017  acyl-CoA dehydrogenase domain-containing protein  22.33 
 
 
391 aa  77.8  0.0000000000006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  23.02 
 
 
379 aa  76.6  0.000000000001  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_014230  CA2559_06170  acetyl-CoA dehydrogenase  24.52 
 
 
602 aa  75.5  0.000000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.214158  n/a   
 
 
-
 
NC_009253  Dred_1490  butyryl-CoA dehydrogenase  21.62 
 
 
378 aa  75.9  0.000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1471  acyl-CoA dehydrogenase domain protein  25.85 
 
 
401 aa  75.9  0.000000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.129109  n/a   
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  23.79 
 
 
375 aa  75.5  0.000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  23.97 
 
 
375 aa  75.5  0.000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_009511  Swit_0824  acyl-CoA dehydrogenase domain-containing protein  24.21 
 
 
393 aa  75.5  0.000000000003  Sphingomonas wittichii RW1  Bacteria  normal  0.294014  normal 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  23.02 
 
 
379 aa  74.7  0.000000000004  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  23.02 
 
 
379 aa  74.7  0.000000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  24.74 
 
 
380 aa  75.1  0.000000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007802  Jann_1327  acyl-CoA dehydrogenase-like  23.55 
 
 
383 aa  74.7  0.000000000005  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  25.43 
 
 
379 aa  74.3  0.000000000005  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6321  acyl-CoA dehydrogenase domain protein  26.1 
 
 
383 aa  74.7  0.000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.249622  normal  0.451082 
 
 
-
 
NC_008688  Pden_5091  acyl-CoA dehydrogenase domain-containing protein  23.63 
 
 
378 aa  74.7  0.000000000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.580305  normal 
 
 
-
 
NC_013743  Htur_1150  acyl-CoA dehydrogenase domain protein  22.83 
 
 
380 aa  74.3  0.000000000006  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  23.66 
 
 
379 aa  74.3  0.000000000006  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  23.66 
 
 
379 aa  74.3  0.000000000006  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  23.02 
 
 
379 aa  73.9  0.000000000007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  23.02 
 
 
379 aa  73.9  0.000000000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1203  acyl-CoA dehydrogenase domain protein  22.18 
 
 
381 aa  73.9  0.000000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  23.02 
 
 
379 aa  73.6  0.000000000009  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  23.73 
 
 
379 aa  72.8  0.00000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0176  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
385 aa  73.2  0.00000000001  Delftia acidovorans SPH-1  Bacteria  normal  0.142689  normal 
 
 
-
 
NC_013757  Gobs_2382  Glutaryl-CoA dehydrogenase  23.35 
 
 
407 aa  73.6  0.00000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1260  acyl-CoA dehydrogenase domain-containing protein  23.56 
 
 
394 aa  72.8  0.00000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.334789  normal 
 
 
-
 
NC_013743  Htur_1175  acyl-CoA dehydrogenase domain protein  25.19 
 
 
381 aa  73.2  0.00000000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013159  Svir_18370  acyl-CoA dehydrogenase  22.89 
 
 
583 aa  72.4  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  24.32 
 
 
376 aa  72.8  0.00000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1282  putative acyl-CoA dehydrogenase  24.9 
 
 
392 aa  72.4  0.00000000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  24.75 
 
 
381 aa  72.4  0.00000000002  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_009511  Swit_1842  acyl-CoA dehydrogenase domain-containing protein  25 
 
 
387 aa  72.4  0.00000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.982054  normal 
 
 
-
 
NC_013757  Gobs_1809  Glutaryl-CoA dehydrogenase  22.78 
 
 
395 aa  71.6  0.00000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.141566  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  22.68 
 
 
379 aa  72  0.00000000003  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  22.68 
 
 
379 aa  72  0.00000000003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  24.32 
 
 
381 aa  72  0.00000000003  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_012803  Mlut_19560  acyl-CoA dehydrogenase  26.04 
 
 
400 aa  72  0.00000000003  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0130  acyl-CoA dehydrogenase domain-containing protein  24.24 
 
 
385 aa  71.6  0.00000000003  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0788  butyryl-CoA dehydrogenase  22.57 
 
 
380 aa  72  0.00000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  23.57 
 
 
380 aa  71.6  0.00000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012857  Rpic12D_3467  acyl-CoA dehydrogenase domain protein  24.25 
 
 
385 aa  71.2  0.00000000004  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0842785 
 
 
-
 
NC_007973  Rmet_2199  acyl-CoA dehydrogenase-like protein  23.33 
 
 
388 aa  71.6  0.00000000004  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00319819  normal  0.0749115 
 
 
-
 
NC_009952  Dshi_1750  acyl-CoA dehydrogenase  23.44 
 
 
381 aa  71.6  0.00000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.317107 
 
 
-
 
NC_010678  Rpic_4539  acyl-CoA dehydrogenase domain protein  24.25 
 
 
385 aa  71.2  0.00000000004  Ralstonia pickettii 12J  Bacteria  normal  0.452852  normal  0.739278 
 
 
-
 
NC_011992  Dtpsy_0148  acyl-CoA dehydrogenase domain protein  24.24 
 
 
385 aa  71.2  0.00000000004  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_18380  acyl-CoA dehydrogenase  26.54 
 
 
549 aa  71.2  0.00000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.355555  normal 
 
 
-
 
NC_012029  Hlac_1141  acyl-CoA dehydrogenase domain protein  23.68 
 
 
387 aa  71.2  0.00000000005  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
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