| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_06170 |
|---|
| Symbol | |
|---|
| ID | 9296730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 1382934 |
|---|
| End bp | 1384742 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | acetyl-CoA dehydrogenase |
|---|
| Protein accession | YP_003715996 |
|---|
| Protein GI | 298207817 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.214158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCAA AAGAATTAAA TAAAGATATG CTTCGTGGTG GGCAATTTTT AGTAAAAGAA
ACACCTTGCG AAAATATTTT TACTCCAGAA GACTTCTCTG AGGAGCAAAA AATGATGCGC
GACTCTGTTA AAGAATTTGT AGACAGAGAA ATTTGGCCAA ATAAAGAGCG TTTTGAGAAA
AAAGACTACG CACTTACAGA AGAAATCATG CGTAAAGCTG GTGAACTTGG TTTATTAGGT
GTTGCTGTTC CAGAAGAGTA TGATGGTTTA GGTATGGGCT TTGTAACTAC AATGTTGGTA
TGTGATTATA TTTCTGGCGC AACAGGATCT ATAGCTACTG CGTTTGGTGC ACATACTGGT
ATTGGTACAA TGCCAATTAC GTTATATGGT AATGAAGAGC AGAAGAAAAA ATATGTACCG
AAATTAGCTA CTGGTGAGTG GTTTGGTGCC TATTGTTTAA CTGAACCTGG TGCAGGTAGT
GATGCCAATT CTGGAAAAAC TAAAGCTGTT CTTTCTGAAG ATGGTACACA TTATAAGATT
ACTGGTCAAA AAATGTGGAT TAGTAATGCA GGTTTCTGTA ATCTATTTGT AGTTTTTGCT
CGAATAGAAG ATGACAAAAA CATTACTGGT TTTATCGTAG AGAACAACCC TGAAAATGGT
ATCTCTATGG GTGAAGAAGA AAAGAAGCTA GGTATACACT CTTCTTCAAC AAGACAAGTA
TTCTTTAATG ATACTGAAGT CCCTGTTGAG AATATGTTAT CTGAGCGTGG TAACGGATTT
AAAATTGCAA TGAATGCTTT AAACGTTGGC CGTATTAAGC TTGCTGCTGC GTGTTTAGAT
GCACAGCGTC GAGTGATAGA CAGTGCAGTT AAGTATGCAA ATGACCGTAT ACAGTTTAAA
ACTCCTATTT CTCAATTTGG AGCTATACAA CAAAAATTAG CTGAAATGGC TACTGCTGCT
TATGTAGGTG AAAGTGCTTC TTACAGAGCT GCTAAAAATA TTGAAGACCG TATCGCTATA
CGTATGGCAG ATGGTGCATC TCACAGTGAG GCAGAACTTA AAGGTGTTGA GGAATATGCA
ATTGAATGTT CAATTCTTAA AGTTGCCGTA TCTGAAGATA TTCAAAACTG TTCTGATGAA
GGTATTCAAA TTTACGGTGG AATGGGCTTT AGCGCAGACA CACCAATGGA ATCTGCTTGG
AGAGACGCTC GTATTTCTCG TATTTACGAA GGAACCAATG AAATTAACAG AATGCTTGCA
GTAGGTATGC TTGTAAAGAA AGCAATGAAA GGTCAAGTAG ATCTTTTAGG ACCTGCAACT
GCAGTTGGCC AAGAGTTAAC CGGTATTCCT TCTTTTGATA CACCAGATTT TTCTGAAGTT
CTTTCTGAAG AAAAAGATAT GATTGCTCGT TTAAAGAAAG TATTTTTAAT GGTAGCTGGT
AGCGCTGTTC AAAAATATGG GCCACAATTA GAAGACCACC AACAATTACT TATGAGCGCT
TCTAATATTC TAATAAAAGT ATATATGGCA GAATCTGCTA TATTAAGAAC CGAAAAGAAC
ATTAAGAGAT TTGGTGAAGA CTCTCAAAAA GAACAACTAG CTATGAGTAA GCTTAATCTT
TATCACGCAG TTGATGATAT TATTAAGAAT GCTAAAGAGG CTATCGTATC TTTTGCTGAA
GGAGACGAAC AACGTATGAT GTTAATGGGA CTTAAGCGTT TTACTAAATA CCAAAATCAA
CCTAACGTGG TTGCTTTACG TAAAACAATT GCCACAACCT TAACAGAAGC TAACACCTAC
TGTTACTAA
|
|---|
| Protein sequence | MESKELNKDM LRGGQFLVKE TPCENIFTPE DFSEEQKMMR DSVKEFVDRE IWPNKERFEK
KDYALTEEIM RKAGELGLLG VAVPEEYDGL GMGFVTTMLV CDYISGATGS IATAFGAHTG
IGTMPITLYG NEEQKKKYVP KLATGEWFGA YCLTEPGAGS DANSGKTKAV LSEDGTHYKI
TGQKMWISNA GFCNLFVVFA RIEDDKNITG FIVENNPENG ISMGEEEKKL GIHSSSTRQV
FFNDTEVPVE NMLSERGNGF KIAMNALNVG RIKLAAACLD AQRRVIDSAV KYANDRIQFK
TPISQFGAIQ QKLAEMATAA YVGESASYRA AKNIEDRIAI RMADGASHSE AELKGVEEYA
IECSILKVAV SEDIQNCSDE GIQIYGGMGF SADTPMESAW RDARISRIYE GTNEINRMLA
VGMLVKKAMK GQVDLLGPAT AVGQELTGIP SFDTPDFSEV LSEEKDMIAR LKKVFLMVAG
SAVQKYGPQL EDHQQLLMSA SNILIKVYMA ESAILRTEKN IKRFGEDSQK EQLAMSKLNL
YHAVDDIIKN AKEAIVSFAE GDEQRMMLMG LKRFTKYQNQ PNVVALRKTI ATTLTEANTY
CY
|
|---|
| |