Gene Hlac_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1141 
Symbol 
ID7400950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1148015 
End bp1149178 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content67% 
IMG OID643708206 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002565805 
Protein GI222479568 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACG AAGGGTTACT CGGTATACTT GATTCCGCTG AACACCGGAT GATTCGGGAC 
ACCGTCCGGG AGTTTTGCGA GGAGGAAATC CGGCCGATCG CCCAGGAGAT CGAGGACGAA
CACCGGTTCC CCGACGAGGT GTTCGCCGAC CTGAACGACC TCGACATGAT GGGCGTGCCG
ATATCCGAGG AGTACGGCGG GCTCGGCGGC GACCAGCTCA TGTACGCGCT CGTCACCGAG
GAACTCGGTC GCGTCTCCGG CGGGATCGGG CTCTCGTACG CCGCCCACAC CTCGCTGGGC
GCGAAGCCGA TCGAGCTGTT CGGCACCCCG GAACAGAAGG AGGAGTGGCT CCGACCGCTC
GCCGAGGGGG GCAAGCTCGG CGCGTGGGCG CTCACGGAGC CCGGCAGCGG CTCCGACGCC
TCGAACATGG ACACGACCGC CGAGTACGAC GCCGACGCCG GCGAATACGT GCTGAACGGC
ACGAAGCAGT TCATCACGAA CGCGACCGTC GCCAACAGCG TGCTGGTAAA GGCCGTCACC
GACTCCGACG CCGGCTACGA CGGCATCTCG ACGTTCATCG TCGACCCCGC AGACGACGGA
TTCGAGGTGA CGACGGTCTG GGACAAGATG GGGCTCAACT GTTCGCCCAC CTGCGAGATA
CTGCTGGACG ACGTGCGGAT TCCGGAAGAC CGGCTACTCG GCGAGGAGGG CGAGGGCTGG
ACGCAGACGA TGAAGACGCT CGACGGCGGA CGGATCTCGA TCGCCGCGCT CTCGGTGGGG
CTCGCGCAGG GCGCCTACGA GGCCGCCAAG GAGTACGCCG GCGAGCGCGA GCAGTTCGGC
AAGCCGATCG CGAAGTTCGA CGCGATCCGC GACAAGGTGG TCCATATGCA TCGGCAGACG
GAGCGCGCCC GCCTGCTCAC GCACAAGGCA GCGACGACGT ACGACGCCGG CAACGAGGTG
ACGCGGGAGT CCGCGCTGGC GAAGCTCGAC GCCAGCGAGG CCGCTCGCGA GGTGGCCGAG
GAGGCGGTCC AGACGCTCGG CGGCTACGGC TACACCACCG ACTTCGCGCC CCAGCGCTTC
TACCGCGACG CGAAGCTGAT GGAGATCGGC GAGGGGACGA GCGAGATCCA ACACGTCGTA
TTAGGGCGCG AACTCGGGTT GTAG
 
Protein sequence
MEDEGLLGIL DSAEHRMIRD TVREFCEEEI RPIAQEIEDE HRFPDEVFAD LNDLDMMGVP 
ISEEYGGLGG DQLMYALVTE ELGRVSGGIG LSYAAHTSLG AKPIELFGTP EQKEEWLRPL
AEGGKLGAWA LTEPGSGSDA SNMDTTAEYD ADAGEYVLNG TKQFITNATV ANSVLVKAVT
DSDAGYDGIS TFIVDPADDG FEVTTVWDKM GLNCSPTCEI LLDDVRIPED RLLGEEGEGW
TQTMKTLDGG RISIAALSVG LAQGAYEAAK EYAGEREQFG KPIAKFDAIR DKVVHMHRQT
ERARLLTHKA ATTYDAGNEV TRESALAKLD ASEAAREVAE EAVQTLGGYG YTTDFAPQRF
YRDAKLMEIG EGTSEIQHVV LGRELGL