| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0062 |
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| Symbol | |
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| ID | 3962274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 64247 |
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| End bp | 65950 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637914901 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_521355 |
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| Protein GI | 89898884 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.541142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTGC TCAATCCACG CCATCTGGTT CGCAACTATC CCGATCAACG CTCACGCGAG
ATCATGGAGA AAACGGTTGC CTTCTTCGAG AAAACCGGCC TGACCAAGCT CAAAGCGGAT
TTTCATGGCG CGGTCTGGTA TGAGGATTTC CTCAACTTCT GCAAGGAAGA AGGCATTTTT
GCCTCCATGA TGACGCCCGC CGAGCACGGC AAGGAAGGCG AACACGCGGT CTGGGACACC
TGGCGCGTTT GTGGTTTTGC CGAGATTCTG GGCTTCTATG GACTCCCCTA CTGGTACGCC
TACCAGGTCT CGGTGCTGGG CATCGGCCCC ATCTGGATGA GCAAGAACAA GAAGGCGCAG
GCGAAGGCGA AACGCCTGCT TGACGAAGGC GGCATTTTTG CCTTCGGCCT GTCCGAGAAA
GAGCATGGCG CCGACATCTA CTCGTCCGAC ATGATCGTCA CCCAGCTGGA AGACGGCAGT
TACCGGGCCT GCGGCGGCAA GTACTACATT GGCAACGCCA ACCAGGCGCG CATGGTGTCC
ACCTTCGGCA AGATGGCCGA TACCGGGGAA TACATTTACT TTGTCGCCGA CTCGCAGCAT
CCCAAGTACG AACTGGTGAA AAACGTGGTC TACAGCCAGA ACTACGTCGC CGAGTTCCGT
TTGCATGATT ACCCTTTGAC TGAAGAAGAC ATCCTGCACC ACGGTGACGA TGCCTGGAAC
GCCGCACTCA ATACCGTCAA CGTCGGCAAA TACAACCTCG GCTGGGCCTC CATCGGCATT
TGCACCCACG CCTTTTATGA GGCTTTCGAT CACGCCGCCA ACCGGCATCT GTACAAGCTG
ACGGTGACGG ATTTTCCACA TGTGCGCCAG CTCTTTACCG ATGCCTACGC GCGCCTGGTG
GCGATGAAAC TGTTCGCACT GCGCGCGGCT GACTACATGA AGGCAGCCTC CAACGAGGAC
CGGCGCTATC TGTTGTTCAA CCCGATCCAA AAAATGAAGG TCACCACGCA AGGTGAAGAG
GTCATCAACC TGCTGTGGGA TGTGATTGCC GCCAAGGGTT TCGAGAAAGA CATGTATTTT
GCGATGGCCG CCGTCGAGAT TCGCGGCTTG CCCAAGTTGG AGGGCACGGT GCATGTCAAC
ATGGCGCTCA TCATCAAGTT CATGGCCAAC TACTTCTTCG CGCCAGCCGA GTATCCAGAA
GTGCCGCGCC GCGATGAGGG CAGCAACGAC AGCTTCCTGT TTGACCAGGG CCCGACCAAG
GGCCTGGGCA AAATCAAGTT TCACGACTAT CACATCGCCT ATGACAGCGT CGATTCCCCT
AACCTGAGCG TTTTCAAGGC GCAGATTGAG ACCTTCAAAC AAATGGCGAT GCTGGCGCCG
CCCACGCCAG CGCAGGCCAA AGACATCGAC TTCCTGCTGA CCGTGGGCGA GATGTTCACG
CTGGTGGTGT ATGGCCAGTT GGTTCTGGAG AATGCCAGGA TTTACAAGAT TGAGCCCGAA
TTACTTGATC AAGTATTCGA CTTCATGGTG CGCGACTTCT CCAAGTTCGC GCTGCAGATG
TACTCCAAAC CCAGCAGCAC CGAAGGCCAG ATGGCGCAGT GCCTGAAGAT GATCAGGAAA
CCGGTGACCG ACGACGTGCG CTACGCCAGG GTCTGGAGCG AGCATGTGAG CAAGATGCAG
GGGCAGTACA AGATGCCCGA TTGA
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| Protein sequence | MLLLNPRHLV RNYPDQRSRE IMEKTVAFFE KTGLTKLKAD FHGAVWYEDF LNFCKEEGIF
ASMMTPAEHG KEGEHAVWDT WRVCGFAEIL GFYGLPYWYA YQVSVLGIGP IWMSKNKKAQ
AKAKRLLDEG GIFAFGLSEK EHGADIYSSD MIVTQLEDGS YRACGGKYYI GNANQARMVS
TFGKMADTGE YIYFVADSQH PKYELVKNVV YSQNYVAEFR LHDYPLTEED ILHHGDDAWN
AALNTVNVGK YNLGWASIGI CTHAFYEAFD HAANRHLYKL TVTDFPHVRQ LFTDAYARLV
AMKLFALRAA DYMKAASNED RRYLLFNPIQ KMKVTTQGEE VINLLWDVIA AKGFEKDMYF
AMAAVEIRGL PKLEGTVHVN MALIIKFMAN YFFAPAEYPE VPRRDEGSND SFLFDQGPTK
GLGKIKFHDY HIAYDSVDSP NLSVFKAQIE TFKQMAMLAP PTPAQAKDID FLLTVGEMFT
LVVYGQLVLE NARIYKIEPE LLDQVFDFMV RDFSKFALQM YSKPSSTEGQ MAQCLKMIRK
PVTDDVRYAR VWSEHVSKMQ GQYKMPD
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